Pungitius pungitius (ninespine stickleback): 119216694
Help
Entry
119216694 CDS
T07626
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04810
Regulation of actin cytoskeleton
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
119216694 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119216694 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119216694 (cyfip1)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
119216694 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
119216694 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
119216694
NCBI-ProteinID:
XP_037325661
LinkDB
All DBs
Position
7:complement(20265010..20283444)
Genome browser
AA seq
1253 aa
AA seq
DB search
MASTVTLEDALSNVDLLEELPLPDQQPCIEPLPSSVMFQPNFNTNFEDRNAFVTGIARYI
EQATVHSSMNVMLEEGQEYAIMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLLTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPSSIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVDYYENKMYLTPNEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWTCTSISSSPQYNICEQMLQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKTDSEYRKLFDLSLQGIQLLSQWSAHVMEVYSWKLVHPT
DKYSNKECPDNAEEYERATRYNYTSEEKFALVEVMAMIKGLQVLMGRMESVFNHAIRHTI
YSALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTVCDWEAGREPHNDPALRGEKDPK
GGFDITVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSGLEGPTILDIERFHRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIEMSMPWILTDHILETKEASM
MEYVLYPLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFVYYKILAGS
LLLDKRLRADCKNQGANIPWPSSNRYETLLKQRHVQLLGRSIDLNRLITQRISAALYKSL
ELAINRFESEDLTSIMELEGLLDINRMTHKLLSKFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNGSTNRFVRTVLPFSQEFQRDKPPNAQPQYLYGSKTLNLAYSS
IFSTYRNFVGPPHIKVMCRLLGYQGIAVVMEELLKVVKSLLQGTIMQYVKTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAMLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHLVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILTRVRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGTHEFTVEQCFGDGLHWAGCMIISLLGQHRRFDILDFSYHLLKVQKHDGKDEVIKSVP
LKKMVDRIRKFQILNNEIFAILNKYLKSGDGENMPVEHVRCFQPPIHQSLASS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggtgaccttagaagatgccctctccaacgtggacctgctggaggagctg
ccgctccccgaccagcagccctgcatcgagcccctcccctcctccgtcatgttccagccc
aacttcaacaccaacttcgaggaccggaatgcgttcgtcaccggcatcgccagatacatc
gagcaggccacggtccactccagcatgaacgtgatgttggaggaagggcaggagtacgcc
atcatgctgtacacctggaggagctgctcacgagcaataccacaggtgaaatgcaacgag
cagcccaaccgagtggagatctacgagaagacggtggaggttctggagccagaagtcacc
aagctcatgaacttcatgtacttccagcgcacggccatcgaccgtttctgcggcgaggtg
cggcgtctctgtcacgcggagcgcaggaaggactttgtctcggaggcgtacctgctgacc
ctcgggaagttcatcaacatgttcgccgtgctggacgagctgaagaacatgaagtgcagc
gtgaagaacgaccactcggcctacaaacgagcggctcagttcctcagaaagatgtcggag
ccttcgtccatccaggagtctcagaacctgtccatgttcctggcaaaccacaacaagatc
acgcagtctctgcagcagcagctggaggtgatcaacggatacgacgagctgctggccgac
atcgtcaacctttgcgtcgactactacgagaacaagatgtacctcactcccaacgagaag
cacatgctgctcaaagtgatggggttcggcttgtacctcatggacggaaacagcagcaac
atctacaaactcgacgccaagaagaggatcaacctcaccaagattgacaagtttttcaag
cagctgcaggtggtccctctgttcggtgacatgcagatcgagctgtcccgctacatcaag
accagcgctcacttcgaggagaacaaatccaggtggacgtgcacgtccatatccagcagc
ccccagtacaacatctgcgagcagatgctccagatccgtgacgatcacatgcgcttcatc
tcggagctggcccgctacagcaacagtgaggtggtgaccggatcggggcgccaggaggcc
cagaagacggactctgagtacaggaagctgttcgacttgtcgctgcagggcatccagctg
ctgtcccagtggagcgctcacgtcatggaagtgtactcctggaaactggttcatccgacc
gacaaatactccaacaaggagtgtcccgacaacgccgaggagtacgagagagccaccaga
tacaactacaccagcgaggagaagttcgccctggtggaggtgatggcgatgataaagggc
ctgcaggtgctgatgggacgcatggagagcgtgttcaaccacgccatccgccacaccatc
tactcggctctgcaggacttcgctcaggtgacgctgcgcgacccgctgcgacaggccatc
aagaagaagaagaacgtcatccagagcgtcctccaggccatccggaagacggtgtgcgac
tgggaggccggccgggagccgcacaacgacccggcgctccgcggcgagaaagatccaaag
ggcggctttgacatcactgtcccgcggcgagctgtcggcccctccagcacgcagctctac
atggtgaggaccatgctggagtctctcgtcgcagacaagagcggctccaagaagactctg
cgcagcggcctggaaggacccaccatcctggacatcgagaggttccaccgcgagtccttc
ttctacacacacctgctgaacttcagtgagaccttgcagcagtgttgcgatctctctcag
ctctggttcagggagttcttcctggagctcacgatgggccgcaggatccagttccccatc
gagatgtccatgccctggatcctcacggaccacatcctggagaccaaggaggcctccatg
atggagtatgtgttgtatcctctggatctgtacaacgacagcgcccactacgctctcacc
aagttcaagaagcagttcctgtacgatgaaatagaagctgaggtgaacttgtgcttcgat
cagttcgtctacaagctggcggatcagatctttgtgtactacaagattctagcaggaagt
ctcctgctcgacaaacgcctgagagccgactgcaagaaccaaggcgccaacatcccgtgg
ccgtcctccaaccgctacgagacgctgctgaagcagcgccacgtccagctcctgggccgc
tccatcgacctgaacaggctcatcacgcagaggatttccgccgccctctacaagtctctg
gagctcgccatcaatcgctttgagagcgaggacctcacgtccatcatggagctggaaggc
ctcctggacatcaaccgcatgactcacaagctcctcagtaagttcctgacgctggacagc
atggacgccatgttccgcgaggccaaccacaacgtgtcggcgccctacggccggatcacg
ctgcacgtcttctgggagctcaactacgacttcctgcccaactactgctacaacggctcc
accaacaggttcgtgcgcaccgtgctgccgttctctcaggagttccagagggacaagcca
cccaacgcccagccgcagtacctgtacgggtcaaagaccttgaacctggcgtacagcagc
atattcagcacctacaggaactttgtgggccccccccacatcaaggtcatgtgccgcctg
ctgggctaccagggcatcgccgtggtgatggaggagctgctgaaggtggtcaaaagcctg
ctccagggaaccatcatgcagtacgtgaagaccctgatggaggtgatgcccaagatctgc
aggctcccccgccacgagtacggctccccaggtatcctggagttctttcaccaccagctg
aaggacatcgtggagtacgccgagctgaagacggtgtgcttccagaacctgagggaggtg
ggcaacgccatgctgttctgtctgctgagcgagcagagcctgtcgcaggaagaagtctgt
gacctgctgcacgccgccccgttccagaacatccttcccagagtccacgtcaaagagggg
gagcgactggacgccaagatgaagcgcctggaggccaaatacaccgccctgcacctggtc
cctctgatagagcgccttggtactcctcagcaaatcgccatcgctcgcgagggcgacctt
ctgaccaaagagaggctgtgctgcggcctgtccatgttcgaggtcatcctcacgcgcgtg
cgaggcttcctggacgaccccatctggcggggcccgttgcccagcaacggcgtgatgcac
gtggacgagtgtgtggagttccaccgtctgtggagcgccatgcagtttgtgtactgcatc
ccggtgggaacccatgagttcaccgtggagcagtgcttcggagacggcctccactgggcc
ggctgcatgatcatctccctgctgggtcagcaccggcgcttcgacatcctggacttcagc
taccacctcctgaaggtgcagaaacacgacggcaaggacgaggtcatcaagagcgtgccc
ctgaagaagatggtcgacagaatccgcaaattccaaatcctcaacaacgagatcttcgcc
atcctgaacaagtacctgaagtccggagacggcgagaacatgccggtggagcacgtccgg
tgcttccagcctccgatccaccagtcgctcgccagcagctga
DBGET
integrated database retrieval system
