Pungitius pungitius (ninespine stickleback): 119216804
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Entry
119216804 CDS
T07626
Name
(RefSeq) ELAV-like protein 1
KO
K13088
ELAV-like protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119216804
03041 Spliceosome [BR:
ppug03041
]
119216804
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119216804
mRNA cycle factors
Stress granule specific factors
119216804
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
General mRNP proteins
119216804
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_ACIN1
RRM_10
RRM_MUD2_C
F07F6_N
RRM_occluded
RBD_DEAH11
RBD_DGKtheta
RRM_DEAH11
YqeY
Motif
Other DBs
NCBI-GeneID:
119216804
NCBI-ProteinID:
XP_037325841
LinkDB
All DBs
Position
7:complement(19636705..19642657)
Genome browser
AA seq
355 aa
AA seq
DB search
MALRRGHIRYLKVCEVQTSQNDVRDGQHASKGASGKELYDNGYCEQMMEDDDSRTNLIVN
YLPQSMSQDELRSLFSSVGDVESAKLIRDKVAGHSLGYGFVNFVNPNDAERAISTLNGLR
LQSKTIKVSFARPSSDMIKDANLYISGLPRTLSQQELEDMFTRFGHIINSRVLVDQASGL
SRGVAFIRFDKRSEAEDAVKHLNGHTPPGSAEPITVKFAANPNQARNSQMMSQMYHGQSR
RFGGPVHHQAQRFRFSPMSVDHMGGGGGVSGSPSGGWCIFIYNLGQDADEAILWQMFGPF
GAVVNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIHSLNGYRLGDKVLQVSFKTK
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcgttaagacgaggacacattcggtacctgaaggtgtgtgaggtccagacgtctcag
aatgatgtcagagatggtcagcacgcctccaaaggagcctctggaaaggagctgtacgac
aacgggtactgcgagcagatgatggaggacgacgactccaggaccaacctgatcgtgaac
tacctgccgcagagcatgagtcaggacgagctgcgcagcctgttcagcagcgtgggcgac
gtcgagtccgccaaactcatccgggacaaagtagcaggccacagtttaggttacggcttt
gttaactttgttaaccctaatgatgcagagagggctatcagtaccctcaatggcctgagg
ctacagtctaaaactatcaaggtctcgtttgcgcggccgagttcggacatgatcaaagac
gcaaacctgtacatcagcgggctgccgaggacgctgagtcagcaggaactggaagacatg
ttcacccgctttggacacatcatcaactccagagtgctggtggaccaggcctcaggtctg
tctcggggcgtggccttcatccgcttcgataagaggtccgaggccgaagacgccgtcaag
cacctgaacgggcacacgcccccgggcagcgccgagcccatcactgtcaagttcgccgcc
aaccccaatcaggcccgcaactctcagatgatgtcgcagatgtaccacggccaatcgcgg
cgcttcggcggccccgttcaccaccaggcgcagaggttcaggttttctccaatgagcgtc
gaccacatgggcggagggggcggagtctcggggagcccctccggcggttggtgcatcttc
atctataatctgggccaggacgccgacgaggcgatcctgtggcagatgttcgggccgttc
ggtgccgtcgtcaatgtgaaagtgatcagagatttcaacaccaacaagtgcaaaggcttc
ggtttcgtcaccatgacgaactacgaggaggccgccatggcgatccacagcctcaacgga
taccgactgggggacaaagtcctgcaggtttccttcaagacaaaatga
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