Pungitius pungitius (ninespine stickleback): 119216858
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Entry
119216858 CDS
T07626
Symbol
rexo1
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
119216858 (rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119216858 (rexo1)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-60S particles
RNases
119216858 (rexo1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
KIAA1549_1st
Motif
Other DBs
NCBI-GeneID:
119216858
NCBI-ProteinID:
XP_037325918
LinkDB
All DBs
Position
7:complement(760884..771162)
Genome browser
AA seq
1255 aa
AA seq
DB search
MLRSTCFFRGIDCPFYTEYIEGKGSRNGCNRPYCHFRHSQQRRASCGAPADVKRQKDLQS
SKKEQGYDPFNPEVVRPQVQENGKSPDSGDLSGALEMVNKAIEEVRSEVEREKRKLSRIG
DEPYDPKESKKVSLSNSVKSNAPPSHMAYDPGSYQMTSGGYNPPPGCSKYTLDSDSHGKN
SNSMEYVPTTRRKPSSRTHQLPSPPTSPKYSTSSSKCKYTVDISKPSTDMEYDPMSNYSA
GIAAKRKKDRDAQASKTELRKKHKLSDRSDEEYVVSLRKTQSQPTGDSKKYTFSDSDEES
SGTEYRPTLLSNLQHRKSNSGSLWAASGKERDERTESKLNALTQRNKEDLAGDSDIQEEV
KEKDSSEKKKVVGQTSYKKGSKSEKVHKLGKEANRTTGSKSSSSSKNKGSIQNSNQDNAK
KENKSHGQRDDGRNTITVKTLAKVQKDGREKKRSDDKVKAVEKGKAVSSKRERVPENGAG
ESKKLKIVEKEQRKDSQDKNGKLHSSQREKDAKKVNKSSLGGGSSSSNIKGSSANSKDKV
KPNIGSPNRKRREEKRRSLSLSHADLFGDESPEEVEPMVDDDDDDDEEPEEVLVRKSADA
LKRGRLNKRKVSELTPSSSDDEGVRVAGNDEVTINFSSYQDDLDFDSDPMEECLRIFNES
KDVKTEDKGRQTKQPSRHLDDERSTESTLTTLFPGQKKRVSHFVAKGSTDAPIVARPYKR
LSAQEVCYKRMQMAQQQAAQISASVNVASQRSSAFSGEKKRIAHRSNPQTTSSKTSPADV
KPAASRVLSPSQSQQTVKAQTTAGILPKTMSTVTQKRMAHTPTMKSSSLKRPVIPIEFGA
KVPNNVRQRYLTTFIDECVKFCPSEDVAFQLALDEEKLVYDRSSSKNIYLNVAVNALKKL
RSKSVSCPSPVTKNPALVTNKRAQSHEDVLGGRHAATTSFTINRMGKQLEEKLTGSTLYR
KLQAYLMTEEQLQEHGYPRTNPEVAGKAVLYNLPEKKATSDPLNKVCCRCGAEYKINVNG
NCIRKEECSFHWGRLRRNKGAGGWETNYSCCAAAVGAPGCQVCKQHVQDGRKETFDGYVT
TFSKALPPDGNGGVFALDCEMCYTKQGLELTRVTVIDSELKVIYDTFVKPESKVVDYNTR
FSGVTEEDLESATITLRDVQAVLLSMFSAESILIGHSLESDLLALKLIHSSVIDTAIVFP
HRIGLPYKRALRNLMAEHLKRIIQDNVEGHDSSEDASACMELMFWKIKEDAKVKR
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgagatccacctgcttctttcgagggattgactgcccgttttacacggagtacatc
gaaggcaaaggaagcagaaatgggtgtaacagaccctactgccacttcaggcacagccag
cagagacgggcgtcctgcggcgctccagccgacgttaaaaggcagaaggaccttcaatcc
tccaagaaagaacaaggttatgaccccttcaacccagaagtcgtgagaccccaggtgcag
gagaatggaaagtctcctgactcgggagacctcagtggggccctggaaatggtcaacaag
gccatcgaggaggtccgcagcgaggtggagagggagaaaagaaagctctctcgaattggg
gatgaaccatacgatcccaaggagagtaaaaaagtgtcactatctaattctgttaaaagt
aacgcaccaccttcccacatggcttatgaccctgggagttatcagatgacatctggaggt
tataaccccccacctggctgtagtaagtataccctggattcagattcccacgggaaaaat
agtaactccatggaatatgttcctactacgaggagaaagccttcatctcggacgcatcaa
ctcccctctcctcccaccagtccaaagtacagcacatcttcctctaagtgtaaatacaca
gtggatatttccaaaccatctacagatatggagtatgatcccatgtctaactactcggca
gggatcgcagcaaaaaggaagaaggatcgggatgcacaagcttctaagacggagttgaga
aagaagcacaaactgtcggataggtctgacgaggagtatgttgtctctttgagaaaaact
caaagtcagccgactggagactccaaaaagtacactttctctgactctgatgaggaaagc
tctggaacagagtaccgacctactttgcttagtaatctccagcatagaaaaagcaatagt
ggatccctttgggctgcttcggggaaggagagagatgagagaactgaaagtaagcttaat
gcactgacacaaagaaataaagaggacctggccggggactcagacatccaggaagaggtg
aaagagaaggacagttcagagaaaaagaaggttgttggtcaaactagttacaagaaaggt
agcaaatctgagaaagtgcataaacttggaaaagaagctaacagaacaacgggcagtaag
agtagcagcagcagtaaaaacaaagggtcaattcagaactcaaaccaggacaatgcaaag
aaggagaacaagagtcatggacaaagagacgatggcagaaacacaattacggttaagaca
cttgctaaagttcagaaggacggcagagagaaaaagagaagtgatgataaggtcaaagct
gtggaaaaaggaaaagcagtctcgagtaaacgagaaagagttccagaaaatggtgcaggg
gaaagcaagaaactcaagatagttgaaaaggaacaaagaaaggacagccaagacaaaaac
ggtaaacttcatagcagtcaacgagaaaaggatgcaaagaaagttaacaaaagcagttta
ggtggcggcagcagcagcagtaacattaaagggagttctgcaaacagtaaagacaaagtg
aagccaaacataggctcaccaaataggaaaagacgggaggagaaacggcgaagtctgagt
cttagccacgcggatctctttggggacgagagcccagaggaggttgaaccgatggtggat
gatgatgatgacgacgacgaagaacccgaagaagtgctggtgagaaagtctgccgacgct
ttgaagaggggccgtctgaacaagaggaaagtgtcagagctgactccgtcttcctctgac
gatgaaggggtccgcgtggcaggtaacgatgaggtcaccatcaacttctctagttaccag
gacgacctggactttgactccgaccccatggaggagtgtttgcggatcttcaatgaatcc
aaggacgtgaagacagaagacaagggaaggcaaacgaaacagccctctaggcatttggac
gacgagagaagcacagagagcactttaaccaccctctttcccggtcagaagaagagagtc
tcccattttgttgccaaaggaagtactgacgcgccgattgtggcgcgaccgtacaagaga
ctctcggcccaggaggtctgctacaagcggatgcagatggctcagcagcaagcagctcag
atctctgcttcggtcaacgtggcctcgcagcgctccagtgccttttctggagagaagaag
agaatcgctcaccgctccaacccccagacaacatcctccaaaacaagtcctgcagatgtt
aaaccagctgctagtcgagttttatcccccagccagagccagcagaccgtgaaggcccaa
accaccgctggcatcttgcccaagacgatgtcgaccgtcacgcagaagaggatggcacac
acacccaccatgaagagtagttcactgaagcgccctgtcatccctattgagtttggggcc
aaggttcccaacaatgtccgccagcgctacctcaccactttcatagatgaatgtgtcaag
ttctgcccatcagaggacgttgccttccaactggcactcgacgaggagaaactggtgtat
gaccgcagcagcagtaagaacatctacctcaacgtagccgtcaacgctctgaagaagctc
cggagcaagagcgtctcatgtccttcgcctgtcaccaagaacccagcgttagtcaccaac
aagagggctcagtcacacgaagacgttcttggaggtcgtcatgcggctacgaccagcttc
accatcaacaggatgggtaaacagctggaggagaaactcactggatccacactgtacagg
aagctgcaggcgtacctgatgacggaggagcagctccaggagcacggataccccagaaca
aatcctgaggttgccggcaaagccgtcttgtataacctcccggagaaaaaggccacctcg
gacccgttgaacaaggtgtgctgtcgatgtggagcggagtataagatcaacgtcaatggc
aactgtatacggaaagaggaatgtagctttcattgggggcggctgcgcagaaataaaggc
gctggaggatgggagaccaactacagctgctgcgctgcggctgtcggggctccgggttgc
caagtttgcaagcaacatgttcaggacgggcgtaaagagacattcgatggctatgtcact
acgttcagtaaagctctgccaccagatggcaacggaggggtgtttgctttggactgtgag
atgtgttacacgaagcagggcctggagctcaccagggtgacggtcatcgactcggagttg
aaagtcatctacgatacattcgtgaaacctgaaagcaaagtagtcgactacaacacgcga
ttttcgggtgtgacggaggaggacttggagagcgccaccatcaccctgagagacgttcag
gccgtgctgctcagcatgttcagtgctgaatccatcctcatcggacacagcctggagagc
gatctgctcgctctcaagctaatccacagttcagtcatcgacacggccatcgtgttcccg
caccgcatcggcctgccctacaagcgcgccttgaggaacctgatggccgagcacctcaaa
cgcatcatccaggacaacgtggagggccacgactcgagtgaagacgcgtctgcctgcatg
gagctcatgttctggaagatcaaggaggatgcaaaggtgaaaagatga
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integrated database retrieval system
