Pungitius pungitius (ninespine stickleback): 119216873
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Entry
119216873 CDS
T07626
Symbol
igsf5b
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04517
IgSF CAM signaling
ppug04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119216873 (igsf5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
119216873 (igsf5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119216873 (igsf5b)
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
CTX family
119216873 (igsf5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_3
Ig_3
I-set
ig
C2-set_2
Ig_2
C1-set
V-set
DUF4381
SIT
Tcell_CD4_C
TM_ErbB1
GerE
PepSY_TM
Motif
Other DBs
NCBI-GeneID:
119216873
NCBI-ProteinID:
XP_037325995
LinkDB
All DBs
Position
3:4298523..4315325
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AA seq
352 aa
AA seq
DB search
MDIDYLLLVLLSCRIQAARDQVQLSPETLTVLRGQEARLTCSTSSTEWTVMVWLLNGKSV
LTIAKETGPLHTVHPNVTAEKSGDSWVFVINRTERHNHGQVTCDLQGIAAKTANLFVQEK
GSVKVFWDKKLAFEGDSVLFKCQAAGWYPSPTVQWQVTDKKVIEAKYNSSTEKSGTLFTV
NSNLNVMATRSSDVSCLASVSALPEPLRSSVRLIVVAEVGLEKEAACTLAPLAIMSTLFA
LLLLLLLCIGAVLWHRRRRQAKAGTQAAVRSDQSVSGGSSVAEATDGKVNLGYSGDGPTD
AVHHELIMETLRPEDFVSFHKVPDVVSSSHLSLHRDGLKEQNSTNTRRMTTV
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgattatctgctcctggtccttctttcatgcaggattcaagcagcccgggat
caggtgcagctgtcgcctgaaacgctaacggtcctgcgaggacaggaggcccggcttacc
tgcagcacctccagcaccgagtggaccgtcatggtgtggctgctcaacggcaaatcggtt
ctcaccatcgccaaagagacgggtcccctgcacaccgtccacccaaatgtgacggccgag
aaaagcggagacagctgggtgtttgtcataaacaggacagagaggcacaaccatggccaa
gtgacctgtgacctccagggcattgctgcgaaaacagcaaacctgtttgtacaagagaag
ggcagcgtgaaagtgttttgggacaagaagttggcttttgagggagactcggtgctgttt
aaatgccaagcagcaggatggtacccttcgcccactgtgcaatggcaggtgactgacaaa
aaggtgatcgaggccaaatacaacagcagcaccgaaaagtcggggacgctcttcactgta
aacagcaatctcaacgtcatggcaacgaggagctcagatgtgtcctgcctggcgtccgtg
tccgccctccctgagccactgaggagcagcgtccgtctgatagtggttgccgaggtgggg
ctggagaaggaagccgcctgcacgctggcgcctctggcgataatgtccaccctctttgct
cttctgctgctcctgctgctctgcatcggcgccgtcctctggcacagacgaaggagacaa
gcaaaagcgggcacacaggcggcagtgaggtccgaccaatcagtgagcggggggagttcg
gttgccgaggcgacagatgggaaggtaaacctgggatattctggtgacggccccacagat
gcagttcaccatgagctaatcatggaaacccttaggccggaggactttgtcagctttcac
aaggtccctgatgtcgtgtcctccagccacctgtctctacacagggacggactaaaagag
cagaactccaccaataccagaagaatgaccacagtttga
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