Pungitius pungitius (ninespine stickleback): 119216941
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Entry
119216941 CDS
T07626
Symbol
gpc1a
Name
(RefSeq) glypican-1
KO
K08107
glypican 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119216941 (gpc1a)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
119216941 (gpc1a)
Proteoglycans [BR:
ppug00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
119216941 (gpc1a)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ppug00537
]
Others
119216941 (gpc1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glypican
Fz
AKNA
Motif
Other DBs
NCBI-GeneID:
119216941
NCBI-ProteinID:
XP_037326085
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Position
7:complement(2563516..2588451)
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AA seq
542 aa
AA seq
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MRVPLLVCVSLCLSAAAGPVAAADRTCADLRQLYTGKGFTLVDVPQTEISGEHLRMCPQG
PTCCTSTMEENLGSLSAKETEGLIREAGRSLQAAFNALHRGFDTYFTELHGNSERSLAEV
LSPLGPLYSQNTRLYGDLYADLRQYYRGSALNLDETLSEFWSRLLERTFKISTLSDVSLS
EDYLDCVAKQQETLRPFGDVPRDMKAKLIRAFVTARSFVQGLIVSGEVVRKVSQVHLSPE
CMKALMKLVYCPHCRGMASVKPCSNYCSNVMKGCLANQADLNPEWQNLIDTMIQVASSFS
TEPSLDVVLSSIPARIYEAVHFLQENMDTFTTRVYQTCGTPGEQGTGSPALHEQRKKSSS
LTASGYKPSPTAGLRLEMQVSDLSSKLREMRQYWTQLPVALCSKLAAGGAGQDKCWNGIT
KARYLPEVMGDGLANQINNPEVELDITKPDMTIRQQIMQLKIMSNRLKNALDGNDVDFQD
ASDDISGSGSGMCTGGQCPRNRPGLYAFSPDNNRVRGAAATPQSRLCGLLLPLPAAVLLL
QR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcccgctgctcgtgtgcgtgtcgctgtgtctgtctgcggcagcgggcccggtg
gccgcggcggaccggacctgcgccgacctgcgccagctctacaccggcaaagggttcacg
ctggtggacgtcccgcagacggagatctccggtgaacatctgaggatgtgtcctcagggt
ccaacgtgttgtacaagcaccatggaggaaaacctgggcagcctcagcgccaaagagacc
gagggactgattagagaggccggcaggtcgctgcaggctgccttcaacgccctccacagg
ggcttcgacacctatttcactgagctgcacggcaactctgagcgctccctggcggaggtt
ctgtctcctctcggccctctgtactcccagaacacccgtctctatggggatctctacgcc
gacctgcggcagtactaccggggctccgctctcaacctggatgagacgctgtctgagttc
tggtcccgcctcctggagcgcacctttaaaatctccactctttcggatgtgagcctgtca
gaagactaccttgattgtgttgccaagcaacaggagacgctgcggccatttggagacgtc
ccacgggacatgaaggcgaagctgatccgggcttttgtcacagcgaggtcgtttgtccag
gggctgatcgtcagcggagaggtggtcaggaaggtctcacaggttcacctgagtccagag
tgcatgaaggccctgatgaagctggtctactgcccccactgtcgcggcatggcctcagtc
aaaccctgctccaactactgctccaacgtcatgaagggctgcctggccaaccaagcggac
ctgaacccggagtggcagaatctgattgacaccatgatccaggtggcctctagtttcagc
acggagcccagtctcgatgtggttctgtcctccatccccgctcgaatctacgaggctgtt
cacttcctgcaggaaaacatggacaccttcacaacaagagtgtaccagacttgcggaact
ccaggtgaacaaggaacaggaagtcctgctcttcatgagcagaggaagaagagcagctcc
ctgaccgcatccgggtacaaaccctcgccaaccgccgggctccgattggagatgcaggtg
tcggatctgtccagtaagttgagggagatgcggcagtactggacccagctccccgtggca
ctctgcagcaaattggcagcaggaggtgccggccaggataaatgctggaacggcatcacc
aaagccaggtaccttccggaggtgatgggtgacggcctggccaatcagatcaacaaccca
gaggtggagctggacatcacgaagccagacatgaccatccggcagcagatcatgcagctc
aaaatcatgagcaacaggctgaagaacgcgctggatggcaacgacgtggacttccaggat
gcaagtgacgacatcagcggctcgggaagcgggatgtgcacagggggccagtgtcctcgg
aaccggccgggactgtacgccttctcgccggacaacaaccgggtcaggggcgctgcagcc
actcctcaaagccgcctctgcggcctcctgctcccgctccccgccgccgtcctgctgctt
cagcgatga
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