Pungitius pungitius (ninespine stickleback): 119216970
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Entry
119216970 CDS
T07626
Symbol
ddx10
Name
(RefSeq) probable ATP-dependent RNA helicase DDX10
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ppug03009
]
119216970 (ddx10)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
119216970 (ddx10)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
90S particles
Helicases
119216970 (ddx10)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
SecA_DEAD
PAS_11
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
119216970
NCBI-ProteinID:
XP_037326133
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All DBs
Position
7:9309358..9312861
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AA seq
826 aa
AA seq
DB search
MEMKGGKKSKTGKNMIDGTDPIRNFEKWKKKYNKTRVGVKRERVARKKPQWQVEREYIDK
LVSRYGEINAKEALRFSDFPISKKTLQGLQGVQCRQPTEIQRQTIGFALLGKDVLGAAKT
GSGKTLAFLIPVLECLYRQQWTSMDGLGALIISPTRELAYQTFEVLRKVGKNHDFSAGLI
IGGKDLKSESEQIHRTNIVICTPGRLLQHMDQTATFHASNLHMLVLDEADRILDMGFMDT
VNAIVENLPATRQTLLFSATQTKSVKDLARLSLKDPEYVWVHEKARFSTPATLEQSYVVC
QLHQKVNMLYSFIKSHPKKKIIVFFACCKEVQYLFRVFCRLRPGVPILALHGKQQQTKRV
EVYNDFLRKHNAVLLATDIAARGLDFPAVNWVLQFDCPEDADTYIHRVGRTARYKEGGEA
LLLLLPSEEEGMVSQLQEKKVPINKIQVNPDKLQNVQLKLEAFLAQEREQKERAQRCFVS
YLRSIYLMKNKEVFDVFKLQIQEYANSLGLAVAPRVRFLSKAQAQRDEKEGLKEQSDGEE
ELRSLKAQLRGGVPQEECQRSEDSGDNEERAKEGEVLFLGSDDESEDDLKDLDLLTVKRK
DVFNLAGDAESPAQLEQVSLKKTLKQTKFTEAKKALKRKFQVNTKVAFSEEGQAVQLWPP
AQRASTQEEEEEEESGISGINMEKARERLKLEDQQFDKQEYRRKVKAKHTEQRLKAKAAR
RDASKQHGHNSEEEEEDEVVAYLAHHSEDEFDPSTLPDPDKLHSEEEMATAKQEHSEEEE
EEDEEELKAGKRKKAKLQMEDYKMLDTGLSLAEDEQLVLHLLGGQK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atggaaatgaaaggcggaaagaaatctaaaaccggtaaaaatatgatagacggcactgac
cccatccgaaacttcgagaaatggaagaaaaaatacaacaagacgagagtaggtgtgaag
cgagagagagtggcgcggaagaagccccagtggcaggtcgaacgggagtacatcgacaag
cttgtcagcaggtacggcgagataaatgccaaggaagcactgaggttctcggacttcccc
atctcaaagaagaccttgcaaggtttgcagggggttcagtgccgacagcccacggagatc
caaaggcagactatcggcttcgctttgctgggtaaagatgttctcggcgcggccaagacc
ggctccgggaagacgctggccttcctcataccggtgcttgagtgcctttaccgtcaacag
tggacttcaatggacggcctcggtgctctcatcatatcgcccacgagagagcttgcctat
cagaccttcgaagtgctccgcaaggtgggaaagaaccatgacttctctgcggggctcatc
atcggcggcaaggacctcaagagcgagtcggagcagatccaccgcaccaacatcgtcatt
tgcacgccggggcggctgctccagcacatggaccagacggccaccttccacgcgtccaac
ctccacatgctagtcctggatgaggcagaccgcatcctagacatgggcttcatggacacg
gtcaacgccatcgtggagaacctcccagcgacccggcagacgctgctgttctctgccacg
cagaccaagtcggtcaaagacttggcgcggctcagcctcaaggacccggagtacgtgtgg
gtccatgagaaggccaggttcagcacgccggccaccctggagcagagctacgtggtatgc
caactccatcagaaggtcaacatgctctactccttcatcaagagccacccaaagaagaag
atcatcgttttcttcgcctgctgcaaagaggtgcagtatctgttccgggtcttctgccgc
ctccggcccggcgtacccatcctggcattgcacggcaagcagcagcagacgaagagagta
gaggtctacaacgacttccttaggaagcataacgctgtgctcctcgccaccgacatagcc
gccagaggcctggacttccccgcggtcaactgggttctgcagttcgactgtccggaggat
gcagacacctacatccaccgggtgggacgcacagcccgatacaaggagggaggggaggcg
ctgctgctgctgcttccgtcggaggaggagggcatggtcagccagctccaagaaaagaag
gtccccatcaataagatccaggtgaacccagacaagctgcagaatgtccaactgaagttg
gaggcattcctggctcaagagagagagcagaaggagcgggctcagaggtgctttgtctcc
tacctccgctcaatctacctgatgaagaacaaggaggtgtttgatgtcttcaagctccag
atccaagagtacgccaattctctgggcctcgccgtggctccgagggtgcggttcttgagc
aaggctcaggcacagagagacgagaaagaaggtctgaaggagcagtctgacggagaggag
gagctgaggagcttgaaggcccaactgagaggtggcgttcctcaagaggaatgccagagg
tcggaagattcaggcgacaatgaggaacgcgctaaagaaggagaggtactgtttctcggt
tcagacgatgaaagtgaagatgatctaaaagacttggatctgctgacagtcaaaagaaag
gatgtctttaacctagcgggcgatgcagagagtccggcgcagctcgagcaggtttctcta
aagaaaacactaaaacagaccaagttcacagaagccaaaaaggccctcaagagaaaattc
caagtcaacaccaaagtggcgttcagtgaggagggacaggccgtgcagctgtggcctcca
gcccaacgggcatcgacccaagaagaagaggaggaggaagagagcggtatttctggtatc
aacatggagaaggccagggagaggctaaaacttgaggaccagcagtttgacaaacaggag
tacagacgcaaggtgaaagccaaacacactgagcagaggctaaaggccaaggcggcccgg
agggatgccagcaaacagcacggacacaactctgaggaggaggaagaggacgaggttgtg
gcgtatctcgcacaccacagcgaagatgagtttgaccccagcaccctgccagacccagac
aagctgcactctgaggaggagatggcgacagccaaacaggagcacagcgaggaggaggag
gaggaggatgaagaggaactaaaagcaggtaaaaggaagaaggctaagctgcagatggaa
gactacaaaatgttggacaccggcctttctctggctgaggacgagcagttagtcctgcat
ctgctgggaggacagaagtag
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