Pungitius pungitius (ninespine stickleback): 119216980
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Entry
119216980 CDS
T07626
Symbol
si:ch211-11n16.2
Name
(RefSeq) zinc finger FYVE domain-containing protein 1
KO
K17603
zinc finger FYVE domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
119216980 (si:ch211-11n16.2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119216980 (si:ch211-11n16.2)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119216980 (si:ch211-11n16.2)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119216980 (si:ch211-11n16.2)
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119216980 (si:ch211-11n16.2)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Other autophagy associated proteins
Others
119216980 (si:ch211-11n16.2)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
119216980 (si:ch211-11n16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FYVE
FYVE_CARP1-2
GBP
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
119216980
NCBI-ProteinID:
XP_037326155
LinkDB
All DBs
Position
3:complement(2552798..2559436)
Genome browser
AA seq
652 aa
AA seq
DB search
MSEILMKEMDSITIKAEEVGDGGRSFLLVDEEENLQVRDESEFVDRLGCGDVAGVKVISI
FGNTGDGKSHTLNHILFGGESVFYTSKSPNSCTVGVWAAYDPTLGLVSLDTEGLLGAAAN
QNQRMRLLLKVLAVSDIVVYRTRAERLHNDMFQFLSNASGAYLKHFTPELRALSSRCGLD
VPLSSLGPAVIVFQETTHTQLLGYDSKGAGHADTLLQKRFHDLGLGTEAFSSVQYVGTQT
ITPPTDYSRLLEAVGQQVKNTHTRSPRQPGIVFHALDALSERFCGELSDDKMTPFSFFPD
EYFTCSAVCLSCNVRCKNGMNHLRDRVPHMADGLCQYVHQFNNKVLICKRCYEGGREVIV
LPKTSASTDNPWFGLAKYAWSGYVLECASCGVIYRSRQYWVGNQDPESGVVRSEVKHVWE
GSDTFLTNHQNAAQRVLDGMNCVIQSVSEYSTGPTKAVAAWVTDQVAPPYWRPNAEITAC
HGCRKVFEEAERKHHCRSCGEGFCHPCSSHRMPVPERGWGSAPVRVCKACYQQGGPADTN
SQVCKVEPRGLIARRVTEVAQSTLDMVTTAVDYPLCFVKDVARPDYWVPDQDIARCHQCS
KTFTPIMSKHHCRACGQGVCGACSARVKPVPSRGWDHPVRVCDGCHARTDVL
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaaatactgatgaaggaaatggacagcatcacgataaaggcggaggaggttgga
gacggtggacggagcttcctgctggtggacgaagaagaaaacctccaggtccgcgacgag
tccgagtttgtggacagactcggctgcggggacgtggcgggggtcaaggtcatctctatc
tttggcaacaccggcgacggcaagtcccacaccctcaaccacatcctgtttggcggcgag
agcgtgttctacacctccaagtcccccaactcctgtacggtgggagtgtgggcagcgtat
gaccccaccctcggcctggtctccctggataccgagggcctgctgggggccgcggccaat
cagaaccagagaatgcggctgctgctgaaggtgttggccgtgtctgatatcgtggtctat
cgtacgcgggccgagcgcctccacaacgacatgtttcagttcctgagcaacgcctcgggg
gcctacctgaagcacttcaccccggagctgagggccctgtccagccgctgcggcctggac
gtgcccctctcgtctcttggtccagccgtcatcgtcttccaggagacgacgcacacccag
ttactcggctatgattccaagggggccggccatgccgacacgctgctccagaagcgtttt
cacgatctgggcttggggaccgaggccttcagctcggtgcagtacgtcggcacccagacc
atcacgcctccgactgactacagcaggctgctggaggccgtcgggcagcaagtgaagaac
actcacacacgctccccccgccagcccgggatagtgttccacgcactggatgccctgagt
gagcgtttctgtggagagctgtcggacgataagatgaccccgttctccttcttcccagac
gagtacttcacctgctcggccgtctgcctcagctgcaacgttcgctgtaaaaacggaatg
aaccatctgagagaccgggtcccccacatggccgatggactgtgccagtacgtacaccag
ttcaacaacaaggtcctcatctgtaagaggtgctacgaaggaggcagagaggtgatcgtc
ctgcccaagacgtcggcttccaccgacaacccgtggtttgggctggccaagtacgcctgg
tcaggatatgtgttggagtgtgccagctgtggtgtgatctaccgcagcaggcagtactgg
gtggggaaccaggaccctgagagcggcgtggtgcgatctgaggtcaaacatgtctgggaa
gggtcggacacctttctgaccaaccaccagaacgccgcccagagggtcctggacgggatg
aactgcgtcatccagtccgtgtccgagtacagcaccgggcccaccaaagcggtcgccgcc
tgggtcacggaccaggtggcgccgccgtactggaggcccaacgcagagatcactgcctgt
catggctgtcggaaagtgttcgaggaggcggagaggaagcaccactgccgatcgtgcggc
gagggcttctgccacccctgctccagccacaggatgccggtgccagagagaggctggggc
agcgcccccgtcagggtgtgcaaggcctgctaccagcagggggggccggcagacaccaac
agccaggtgtgtaaggtggagcctcgcgggctgatagctcgcagggtgacggaggtggcc
cagtcgacactggacatggtcacgaccgccgtggactacccgctctgctttgtgaaagac
gtggctcggccggactactgggtgccggaccaggacatcgcccggtgccaccagtgctcc
aagaccttcacccccatcatgtccaagcaccactgcagggcctgcggacagggcgtgtgc
ggcgcgtgctccgctcgcgtcaagcccgtgccctcccggggctgggaccacccggtccgg
gtgtgcgacggctgccacgcccgcaccgatgtcctgtga
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