KEGG   Pungitius pungitius (ninespine stickleback): 119216982
Entry
119216982         CDS       T07626                                 
Symbol
polr2eb
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03020  RNA polymerase
ppug03420  Nucleotide excision repair
ppug04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    119216982 (polr2eb)
  09124 Replication and repair
   03420 Nucleotide excision repair
    119216982 (polr2eb)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    119216982 (polr2eb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ppug03021]
    119216982 (polr2eb)
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119216982 (polr2eb)
Transcription machinery [BR:ppug03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     119216982 (polr2eb)
  RNA polymerase III system
   RNA polymerase III
     119216982 (polr2eb)
  RNA polymerase I system
   RNA polymerase I
     119216982 (polr2eb)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      119216982 (polr2eb)
SSDB
Motif
Pfam: RNA_pol_Rpb5_N RNA_pol_Rpb5_C AAA_3 NYD-SP12_N
Other DBs
NCBI-GeneID: 119216982
NCBI-ProteinID: XP_037326154
LinkDB
Position
7:complement(19582737..19585178)
AA seq 210 aa
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLDEFKSQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFIFFPEEPKVGIKTIKMYCQRMQEENITRAIIVVQMGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHIVMTKEEVVELLGRYKLKESQLPRIQAGDPVA
RYFGLKRGQVVKIIRPSETAGRYITYRLVQ
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgacgaagaggaaacctacaggctttggaagattcgtaaaaccatcatgcagctg
tgccatgacagaggttacctggtgacacaggacgagctggaccagaccctggatgagttc
aagagtcagtttggagacaagcccagcgagggtcgccccagacgcacggacctcactgtg
ctggtggcgcacaacgacgaccccaccgaccagatgtttattttctttcctgaggagcca
aaggtgggaatcaagacgatcaagatgtactgtcagaggatgcaggaggagaacatcaca
cgagccatcatcgttgtccagatgggcatgacgccgtcagccaaacagtctctcgttgac
atggcacccaaatacatattggaacagttcctccagcaggagctgctcattaacatcaca
gagcacgagcttgttccagaacacatcgttatgacgaaagaggaagtggtggaacttctg
ggacgatacaaattaaaggagagtcagttgccgaggattcaggctggtgaccctgtggct
cgatactttggcttgaaaagaggacaggtggtgaagatcatcagacccagtgaaaccgct
gggaggtacatcacatacagactggtgcagtga

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