Pungitius pungitius (ninespine stickleback): 119217016
Help
Entry
119217016 CDS
T07626
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119217016 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119217016 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119217016 (her6)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119217016 (her6)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119217016 (her6)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
119217016 (her6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_IRO3
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
119217016
NCBI-ProteinID:
XP_037326197
LinkDB
All DBs
Position
7:complement(14255106..14256940)
Genome browser
AA seq
277 aa
AA seq
DB search
MPSDMMEKTSSSPVAATPASMNTTPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRAQMTAALNTDPTVLGKYRAGFSECMNE
VTRFLSTCEGVNTEVRTRLLGHLASCMTQINAMNYPSQHQHPHQLPSNAGPTHPSFGPPS
MQIPSSSPQVLPMNPVTCKGGSSPASLPSDGTKVYGGFQIVPATDGQFAFLIPNAAFAPN
GPVIPVYANNAGTPLPLPAAVSPGAPSGNADSVWRPW
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgccttccgatatgatggaaaaaacttcctcttctccggtcgctgcaactccggcgagc
atgaacactactccggataaacccaagacagcatccgagcacagaaagtcatccaagcca
ataatggaaaagaggagaagagccagaatcaacgagagcttggggcagctgaaaactctc
atcctggatgcgctcaaaaaagatagctcgagacactccaaactggagaaggcggacatc
ctggagatgacggtgaagcatctccggaacctccagagggctcagatgaccgctgccttg
aacactgaccccactgtcttgggaaaatatcgcgccggtttcagcgagtgcatgaatgaa
gtcacccggttcctgtccacctgcgaaggcgtcaacaccgaggtcagaacgcggctcctc
ggccacctggccagctgcatgacccagatcaacgccatgaactaccccagccagcaccaa
cacccgcaccagctcccctccaacgccggaccgacccacccgtccttcggccccccgtcc
atgcagatccccagctcgtccccgcaggtcctgcccatgaacccggtgacctgtaaaggg
ggctcgtcgccggctagcttgccgtcggacggcaccaaagtgtacggcggtttccagatc
gtgcccgccacggacggacagtttgcgttcctcatacccaacgcggctttcgcgccgaac
ggccccgtcatccccgtctacgccaacaacgcgggcacgccgctgcccctgccggccgcg
gtctcccccggagccccgtcgggcaacgcggactcggtgtggcgaccgtggtga
DBGET
integrated database retrieval system
