KEGG   Pungitius pungitius (ninespine stickleback): 119217082
Entry
119217082         CDS       T07626                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ppug03009]
    119217082 (wdr18)
Ribosome biogenesis [BR:ppug03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    119217082 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_alt WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st WDR55 WD40_MABP1-WDR62_2nd Beta-prop_SCAP ANAPC4_WD40 Beta-prop_IFT122_1st Beta-prop_WDR19_1st Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_SPT8 WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_DCAF4 Beta-prop_NWD2_C Beta-prop_DCAF12 Beta-prop_Nup120_160 TAF1C_beta-prop WDR54 Ge1_WD40 KNTC1_N
Other DBs
NCBI-GeneID: 119217082
NCBI-ProteinID: XP_037326343
LinkDB
Position
7:19654516..19667123
AA seq 428 aa
MAAPLEVIVTSDSGSQLWNSTVFDLHSGSSLLSYRGGNSAARTLTVLNGEYLLSAQLGKN
FINMWEIQRKDQLQQKMVCQGLVTCLTASRNGLFLVAGVAEAVYLWEVSTGKLLSVLSRH
YQDITCLKFTDDSSHFVSGGKDNLAVVWSVSSVIQLDLSHTPEPRHVLSRHSLPITDLHC
GLMGAQARVATASLDQTVKVWELSSGELLLSVLFDVEIMSVTFDPCEYFLFCGGSDGNIF
QVSLCSQSLSRDKTFQSDNDGNQVFKGHRNLVTCLSVSMDGTLLLSGSHDETARLWDVQS
KQSIRCLAHKGPVTNAVIMAAPANMFLPDSRPGVPLPRFSRHLHASEGGDSGEVCVRLGL
YTQDEEQTYLQKADRLNNLMNAVTDKSVFGDGENTKVRVAELEEEVQTLKKVNKDLYDFS
SQLLTKPT
NT seq 1287 nt   +upstreamnt  +downstreamnt
atggcggccccacttgaggtgatcgtgaccagtgactccggctcgcagttgtggaacagc
accgtgttcgacctgcacagcggctcgagcctgctgtcctaccggggagggaacagcgcc
gcgcggacgctgaccgtcctcaatggcgagtacctgctgtccgcccagctgggcaagaac
ttcatcaacatgtgggagatccagaggaaggaccagctgcagcagaagatggtttgtcaa
ggtctcgtcacctgtctgaccgcctcgcgcaacggactcttcctcgtggccggagtggcg
gaggcagtttacctgtgggaggtgtctacaggtaagctgctgtctgtcctcagtcgtcac
tatcaggacatcacctgcctgaaattcacagacgacagcagccatttcgtttcgggagga
aaagacaacctcgctgtggtgtggagtgtctccagtgtgatccagctggatttaagccac
acccctgagccgcgtcacgtcctgtctcgtcactctctaccaatcacggacctgcactgc
ggcctgatgggagctcaggccagagtcgccaccgcctcgttagaccaaaccgtcaaggtg
tgggagttgtcctcgggtgagctgctcctgtccgtcctgtttgatgtggagatcatgtcc
gtgacctttgacccctgcgagtacttcctgttctgcggcggcagtgacggcaacattttc
caggtgtctctgtgcagccagagtcttagtcgggacaagacgttccagtcggacaacgac
gggaaccaggtcttcaaaggacacaggaacctggtgacgtgtctgtctgtgtccatggac
gggactctgctcctctccggttcccatgacgagacggctcggctctgggacgtccagagc
aaacagagcatccgctgcctcgcccacaaaggtccggtgaccaacgcagtcatcatggcg
gctccggccaacatgttcctgcccgacagccggcccggcgtcccgctgccgcgcttcagc
cggcacctgcacgcctccgagggcggcgactcgggcgaggtgtgcgtccgcctgggactc
tacacgcaggacgaggagcagacgtacctgcagaaagctgacaggctgaacaacttgatg
aacgctgtgactgacaagtcggtgttcggggacggggagaacaccaaggtccgggtggcg
gagctcgaagaggaggtccagactctgaagaaggtcaacaaagacctgtacgacttctcc
agccagctgctcaccaaacccacataa

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