Pungitius pungitius (ninespine stickleback): 119217108
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Entry
119217108 CDS
T07626
Symbol
sbno2b
Name
(RefSeq) si:ch73-63e15.2 isoform X1
KO
K26273
protein strawberry notch
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119217108 (sbno2b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
119217108 (sbno2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Ran-binding
Motif
Other DBs
NCBI-GeneID:
119217108
NCBI-ProteinID:
XP_037326375
LinkDB
All DBs
Position
7:19509510..19555809
Genome browser
AA seq
1599 aa
AA seq
DB search
MPTLPSALAMDVDGDSYLHPEGPQLDSSLFSVAPTNMEGSIYASSGSWGSYSQQPGYSIL
CPMQSGNQQYHLNSSTTTPAPDEHMDAYSGFSDVDFSSLGLPANGDFHQDLSCIDDLSTN
SLFSSPADSLSEYADAQSLISPDNLNPVLTLRDVNTSAAPAAATAAPAQRQLELNGTSRF
HGLASLDDITALISPPPLGGFQLQRTQTPQEEEEDADEEETEELGHVDTYAEYRPSKSTI
GISHPDIVVETNTLSSVPPPDITYTLSIPEPTINCGLLSALQLEAIIYACQQHEVILQNN
QRAGFLIGDGAGVGKGRTVAGIILENYLKGRKKSLWFSISNDLKFDAERDLKDIDAPNIP
VHALNKIKYGDTATSEGVLFATYSALIGESQAGGQHRTRIKQILDWCRPDFDGVIIFDEC
HKAKNATSTKMGKAVLDLQNKLPRARVVYASATGASEPKNMIYMSRLGIWGEGTPFRAFE
DFLHAIEKRGVGAMEIVAMDMKVSGMYIARQLSFSGVSFRVEEIGLDSDFKLVYNKAAKL
WAEALQVFMRAADELGLVSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELAKKELLAGKC
IVIGLQSTGESRTREVLDENDGHLDRFVSAAEGVFQSLVTKHFPSEKQRREKAPGNKRKR
KPRGRQPKVPKHTVDSGGVINISDDSSSDSDGVDTDSNSSPDSLLDNDDVIFVNHTSCQT
ARVEEMKQSLLNKIAVLGKELPLNTLDELIDKFGGPDQVSEMTGRKGRVVRRPDGSVRYE
SRAEQGLTIDHINIKEKDRFMGAEKFVAIISEAASSGISLQADKRVKNQRRRVHMTLELP
WSADRAIQQFGRTHRSNQVTAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATE
SRDLSKYNFENKYGTKALDKITKAILGHIENKVPPPKGYPAGEAMFFRDMKIGMMDVGIF
CRESRFGINTEKDCSITKFLNRILGLEVHKQNFLFQYFTDNFDYLIEKDKKEGKYDMGIL
DLAPGNDEIYEEKQEIFLTVGNPQDGQVVLYKISVDRGMPWDEAFNRSLKLSGPDEGFYL
SLKLRGNHPCVLLAEQGRGKNLIVYKPNIGKQTHPESLDNLQLRYRKVTPEEARESWENQ
FTFSFKKCSHANWNGKCKKIEEGQECLQGMRLRQYHMLCGALLRVWKRVSDVVSDLTSSS
ILQIVRLKTKHHNKQVGIKIPENCVARVREELLQMDEEVKRRRKEREQQAAEQRLAAERA
HKMEQDNKHLLANLFNQKPMLNQSLAQSLAHSQKQKPSQSALQRAPPGSASQLQRLQSLQ
PNVPLLSLQRNPGPAQQRTHGGWLNVNGGNPGSAPSSASIRSNFSQFYPQSFPAHFQQMK
SPSLPLRPAAPSLGKNPLDEILDLTTSSPSPSPDSTEVALSLDGLAGHSAAYGEDFSLES
LIAQAAPSAQLAALTQQPLLLQQNHNLLASTHHQDLIDLFDLPLSPQMPTQKASPSSSTS
SCSSSASSTSNSLAAHVPAGLLAASGLVPTSSSSSSLFSSPSPSSSLFSSSSPCFPSNYL
LPQSDSLPLPNGHLDVREALNSILHGPDRGSVIKYRPQD
NT seq
4800 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccctcccctcagcgctggccatggacgtggacggggacagctacctgcatcca
gaaggccctcagctagacagcagcttgttctctgtggcccccaccaacatggagggttca
atatacgcctcctctggttcctggggatcctactctcagcagcctggatacagcatactc
tgccctatgcaatctggaaaccagcaataccacttgaacagcagcactaccacccccgct
ccggatgagcacatggacgcgtactcgggattctccgacgtggacttttccagcctcggc
ctccccgccaatggagacttccaccaggacctgtcctgcatcgatgacctctccacaaac
tccctgttctcgtcgccggccgactcgctgtcggagtacgccgacgcgcagtccctcatc
agccccgacaacctgaacccggtgctcaccctgagggacgtcaacactagcgccgccccc
gccgccgccaccgccgcaccagcacagaggcagctagagctgaatggcaccagcaggttt
catggcttggccagtttggatgatattactgctcttatcagccccccacctttaggagga
ttccagcttcagagaacccagacaccccaggaggaggaagaggatgccgacgaagaagag
accgaggaactgggacatgtagacacatacgccgagtacagaccttccaaatccactata
ggaatttctcatcccgacatcgtggtggagaccaacacgctatccagcgtcccccctccc
gacatcacgtacacgctgtccatccctgagccgaccattaactgtggcctgctgtccgct
ctgcagctagaggccatcatctacgcctgccagcaacacgaggtcatcctgcagaacaac
cagagggcaggcttcctgatcggagatggcgccggggtcgggaagggacgcacggtggca
ggaatcatcctggagaactaccttaaggggaggaagaaatcattatggttcagcatatcc
aatgacctgaaatttgatgcagagagggatctcaaagacatagatgcaccgaatatcccc
gtgcatgccttaaacaagattaagtatggagacacagctacctcagaaggagttctgttt
gcaacttactctgcgttgattggcgagagccaggcgggggggcagcaccggacccggatc
aaacagatcctggactggtgcaggccggacttcgacggagttattatttttgacgaatgc
cacaaagccaagaatgccacttctaccaagatgggcaaggcggtgcttgacctgcaaaac
aagctgccgagggcccgagtggtgtacgccagtgccacaggtgcctccgagccaaagaac
atgatctacatgagccgcctgggaatctggggcgagggcacgcccttcagggccttcgaa
gacttcctgcacgccattgagaagaggggcgtcggtgccatggagattgttgccatggac
atgaaggtcagcggcatgtacatcgcgcggcagctgagcttctcgggcgtgtctttccgc
gtcgaggagatcgggctggacagcgacttcaaactggtctacaacaaagctgccaaactg
tgggcggaggcgctgcaggtgttcatgcgtgcggcggatgagctgggcctggtcagcagg
aagtccctgtggggccagttctggtcgtctcaccagcgcttcttcaaatacctctgcatc
gctgccaaggtccgctgcctggtggagctggccaagaaagagttgctggccggaaagtgc
atcgtcatcgggctgcagtctaccggagagtcccggaccagagaagtcctcgacgagaac
gacggccatctcgacagatttgtttctgcagcagagggagttttccagtccctcgtaacg
aagcatttcccctcagagaaacagaggcgagagaaagccccgggaaacaagagaaaacgg
aagccaagaggtcggcagccgaaggtaccgaagcacacggtggacagcggcggcgtgatc
aacatcagcgatgacagcagcagcgactcggacggcgtggacaccgactccaactcctcc
ccggactctctgctggacaatgatgacgtcatctttgtcaaccacaccagctgccagaca
gccagggtcgaggagatgaagcagagcctcctcaacaaaatagctgtgctgggaaaagaa
ctacctctcaatacgttggacgagctcatcgataagttcggaggaccggatcaagtctca
gagatgaccggtcgcaagggtcgcgtggtgcggcgtcccgacggcagcgtccgctacgag
tcccgggccgagcagggcctcaccatcgaccacatcaacatcaaggagaaggaccgcttc
atgggcgccgagaagttcgtggccatcatctcggaggcggccagctcgggcatctccctg
caggcggacaagcgagtgaagaaccagcggcgcagggtccacatgaccttggagctgcct
tggagcgcagacagggccattcagcaatttggtcgcacacatcggtccaatcaggtgacg
gcgccggagtacatcttcctcatctcagagctggctggggagagacgcttcgcctccatc
gtggctaaaagactagagagcctgggtgcactgacccatggagacagaagagccacagaa
tccagggacctcagcaagtacaattttgagaacaagtacggtaccaaggctctcgataag
atcaccaaagccatcctcggccacatagaaaacaaggtgccccctcccaaaggctaccct
gcgggcgaagccatgttcttcagagacatgaagatcggaatgatggatgtgggcatcttt
tgtagggagtcgcgctttgggatcaatacagagaaagactgcagcattacaaagttctta
aatcgcatcctgggcctggaggtgcacaagcagaactttctgttccagtacttcacggac
aactttgactacctgatcgagaaggacaagaaggagggcaaatacgacatgggaatccta
gatctggctccgggtaacgacgagatctacgaggagaagcaggagatattcttgacggtt
ggaaatcctcaagatggacaggttgttctctacaagatcagtgtggaccgaggcatgccc
tgggacgaggccttcaacaggtcactaaagctcagcggtcccgatgagggattctacctt
tccctgaagctgcggggaaaccacccgtgcgtgctgctggcggagcaaggacgaggcaag
aacctcatcgtctacaagcccaacatcggcaagcagacgcaccccgagagcctggacaac
ctgcagctgcgctaccgcaaggtgacgccggaggaagccagggagagctgggagaaccag
ttcaccttctccttcaagaagtgcagccatgccaactggaatgggaagtgtaagaagatc
gaggaaggtcaggagtgtctgcagggcatgcgcctccgtcagtaccacatgctgtgcggc
gccctgctgcgggtgtggaagcgtgtatccgacgtggtgtctgacctcaccagctccagc
atcctgcagatcgtccgccttaaaaccaaacaccataacaagcaagtcggtatcaagatc
ccggagaactgcgtggcccgcgtgcgcgaggagctgctgcagatggacgaggaggtgaag
aggagacggaaggagcgcgagcagcaggccgccgagcagcggctggcggccgagcgcgcg
cacaagatggagcaggacaacaagcacctgctggccaacctgttcaaccagaagccgatg
ctcaaccagtcgctggcgcagtcgctcgcccacagccagaagcagaaaccgagccaaagc
gccctgcagagggcgccgccggggagcgcgtcccagctgcagcggctgcagtccctccag
cccaacgtccccctgctgtccctgcagaggaaccccggcccggcgcagcagaggacccac
ggcggctggctcaacgtcaacggcggcaacccgggctccgcccccagctcggccagcatc
cgctccaatttctcccagttttacccacaatccttcccggcgcatttccagcagatgaag
agcccatcgcttccgctgcgtccggccgcgccgtccctcggcaagaaccccctggacgag
atcctggacctgaccacgagctcgccgtccccctcgccggacagcacggaggtggcgctg
agcctggacggcctggcgggacactcggcggcgtacggcgaggactttagcctggagtcg
ctgatcgctcaggccgcgcccagcgcccagctcgccgcgctgacccagcagcctctcctg
ctgcagcagaaccacaacctgctggccagcacccaccaccaggacctaatagacttgttt
gacttgcctctgtccccccagatgcccacgcagaaagccagcccctcgtcctccacctcc
tcctgctcctcctccgcgtcctccacctccaacagcctggcggcgcacgtccccgccggc
ctcctggcggcgtccggcctggtcccaacgtcgtcgtcgtcctcctccctgttctccagc
ccgtccccgtcctcctccctgttctccagctcgtccccttgcttcccctccaactatctc
ctcccccagtcggactcgctgcctttacccaacggccacctcgacgtccgcgaggccctg
aacagcatcctgcacgggccggaccgcggctccgtcatcaagtaccggccgcaggactga
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integrated database retrieval system
