Pungitius pungitius (ninespine stickleback): 119217345
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Entry
119217345 CDS
T07626
Symbol
tsku
Name
(RefSeq) tsukushi isoform X1
KO
K08130
tsukushi
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119217345 (tsku)
Proteoglycans [BR:
ppug00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
119217345 (tsku)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_6
LRR_14
LRR_EndoS
LRR_NXF1-5
LRRNT
Motif
Other DBs
NCBI-GeneID:
119217345
NCBI-ProteinID:
XP_037326734
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All DBs
Position
3:3424299..3429347
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AA seq
390 aa
AA seq
DB search
MSMFCVRACARAVGTLLKAFRRGPFSSHLLMERRQDLKKKSTMALLLWFGVSLLASVQSS
GVKNCHRDCRCEVESFGLFDSFSLTRVDCRGLGADTPMPITIPLDTAHLDLSSNALGPLG
DTMLAGPGYTTLVSLDLSSNLITKVTPSALSKLRYLETLDLSHNRLESLSTSCFAGIPLV
EVDLSHNSFQEFDMDVFATKVSGEPVSVDLSCNELASVSATSRGRVLRVQNLNLSSNRLL
SVPRLAGLSLRYLNLDGNPIARVEEGAFAELTDMVYLSISGLRELAEVRARAFKSLRSLQ
VLDLSNNPQLKTLSPAVFSGLDSLQELNLSGSGVASLPNNMLSNLPSIKSITLGRSVHCW
RSQKQGQFHRQLGQVQHDEVLTCDVEGIVL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttctgcgtgcgtgcgtgcgcgcgggcagtgggcacgctgctaaaggcgttc
cggcgaggtccgttcagctctcatttgctcatggagagacgacaagacctgaaaaagaag
agcacaatggcgctcctcctctggttcggcgtgtcgctgctggcctccgtccagtccagc
ggcgtcaagaactgccaccgcgactgccgctgcgaggtggaaagcttcggcctgttcgac
agcttcagcctgacccgggtggactgccgggggctgggagccgacacccccatgcccatc
accatcccgctggacaccgcccacctcgacctgtcgtccaacgcgctgggcccgctcggc
gacaccatgctggccgggccgggctacaccaccctggttagcttggacctgagcagcaac
ctcattacaaaggtgacacccagcgctttgtccaagctgcggtacctggagacgctggac
ctgagccacaaccgcctggagagcctctccaccagctgcttcgccggcatccccctggtc
gaagtggacctcagccacaacagcttccaggagttcgacatggacgtgttcgccacgaag
gtcagcggggagcccgtcagcgtggacctgtcctgcaacgagctcgcgtccgtctcggcg
acctcgcgcggccgggtgctgcgcgtccagaacctgaacctgtcgtccaaccggctgctg
agcgtgccgaggctggcggggctgtcgctgaggtacctcaacctggacggtaaccccatc
gcgcgcgtggaggagggggcgttcgccgagctgacggatatggtctacttgtccatcagc
ggcctccgcgagctcgcagaggtccgggcgcgtgccttcaagagcctgcgcagcctgcag
gttcttgatctctccaacaacccgcagcttaagaccctgagcccggccgtcttcagcggg
ctggactccctgcaggagctgaatttgtccggctccggcgtggcgtccttgcccaacaac
atgctgagcaatctgcccagcatcaagagtatcacgctgggacgaagcgtccactgctgg
aggagccagaagcagggacagtttcaccggcaactgggccaggtccaacacgacgaggtg
ctgacctgtgacgtggagggcatcgtgttgtga
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