Pungitius pungitius (ninespine stickleback): 119217366
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Entry
119217366 CDS
T07626
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119217366
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119217366
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
U-box type E3
119217366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_3
zf-CCHC
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
119217366
NCBI-ProteinID:
XP_037326775
LinkDB
All DBs
Position
9:complement(17738059..17751849)
Genome browser
AA seq
1766 aa
AA seq
DB search
MSCVHYKFSSKLDYNTVTFDGLHITLNELKKQIMGRERLKATDCDLQITNAQTLEEYTDD
EVHIPKHSSVIVRRTPLGGVKPAGRTFIVDRSDTAVVGSSRPTDSSPSMSLAQLAKTANL
VDANASEEDKIKAMISQSNHEYDPMHYSKKAVGPPPAHYTCFRCGKAGHYIRQCPLLMIQ
DKSVEGTKPVRISKGIPQSFMVKVEPGTKGAMLTSTGEYAIPAIDAEAYAQGKKERPPFV
PHDQSSSEDDTDPIPDELLCPICNDLMTDAVVIPCCGNSYCDDCIRTALLDSEEHTCFTC
KQSDVSPDNLIANKFLRQAVNNFKNETGYTKHVRKQLQNAAPPPPRPQLVRPLHSRQQDP
LMAHIAHPPSTSAPATAPPVQAPPPAPATAPTSAPAPAREPSPAPAASAATSAPTPPHAA
ATTEERDDSPAPAADHHSPMHSTSHGEPPPPGETNPEPTVRPDSSGTSNYHLNAMGHPPP
IRPPHPPGHQSRPHQPLRGGGGRPWERFYRGRGDHPSTHLLTAPPPAPQPPVYPAPSMYP
PPPQSYPPPYTSGPGLLPPVMGYQPQPMYAPGPPGLNPPWVPPGTQPPLMPLPPLGQPPL
SKEDFYRQRHLRQDNVTSKLDEFTKDFHKELMKYRNAPKRRRPSYSRSRSYSRSPFSRSP
YSRSRSRSRSRSYSYSPSRSRSRSHGRSYPRSPYSRRNGRSYGRSRSRSRSRSYGYRRSG
SPRSPPPYRPGGWEGPEGAGPYRSRSRSPGPGGFRTRSPGGRKPPPRELPPYELKGPSPG
GNERWERERYRQWEKEYADWYNQYYKDYDNPHTSMHHRGRASRDRERDRMSPLSRNYSPQ
GRGRRGREERGPPPNQPPSSSSSGAKSSAKVLKPKKVKKRRTGDESEGSHQSVDRGDATP
VRDEPMDEIPSLVITSPMSSKASVGAATSKAPASKSTATPVKPSTKSTSKTPSDRSKKDK
GQKVKAKVKTESVKGKSEKGKKRPGEGVATKKDSSSSSSSGTKPLKAIKTKPEDPPNSTP
KKEKAKSAAVRPGLLKTPPQSCQSLPLHHSTLHDGPRSGHDMRGRRDLPQGGGLLPTPHQ
HGLQLLHRPPSPDTRRRMGEEGRSLLGPPPGKLRRIDGLVVGCDVLSHSHISHQPPLHRL
PPPSDRPGLLPIPGSRDMGRGDADRGSIRPLMDLQVKPLTQRRIKLNRDLGRKSSTGTPA
DRAPSASEKTTSTSDRSATANLSEGDRPVSTADGALRKERSASAERGVCRDRPGSAGERP
QGSDREPSRSSGLDRERDRASGSDRAVMSDRDRERERDRDRDRERDRDRDRVSSSQKMAV
TVERDLEGERSTRAERKSSSAGGRSVSLDKMTIAEKSSSSKSSTDAEEKPSTSSKERGDG
SERSAKSHRSASKDKTERSVPSGEKPAAAHREAVKDAEEPSVKSKPRISRKAPTSHTASS
SRSAQETKRDSDKDQKSASSKPAEQLPPSPVKSISPEPVAHSEEPLIQPPPRSKWEREDD
EEGLENGPSAPKEPSPVPQRSRGKEGQTEAPKPVRSEGRESSREERRGPAREEKKGRAPR
EEGRGGRTAQTSSDKPSKAKLVREEGRGGREEGRAAAREEGRGGARDEVRGASAKEERAA
EGRGGGGGGREESRGLEPRRQRLCSDLGLATDEAAFVPDYSEGEGSEAERGRSGSASLSA
SQPSSPTQSAHSGSAAASAATAADKKKKKHKKHKKHKKHKKHGPHIKEGEHKENKHKHKK
KKHKKSKDKDVEEEERPEKAVEGSPH
NT seq
5301 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtgtgttcactataagttctcttccaaactggactacaacactgtcactttcgat
gggctccatattaccctcaacgagcttaaaaagcagattatgggccgagagcgcctcaag
gccacagactgcgacctgcagatcaccaatgcgcaaactctagaagaatacaccgatgat
gaagtgcacatcccaaaacactcgtctgtgatcgtccgtcgcactccgcttggtggagta
aaacctgctggcaggacgttcattgtagatcgttctgacacagctgtggtgggatcttct
agacccacggattcttctccatctatgtcgctcgcccaacttgccaagactgctaacctg
gttgacgctaatgcatcggaggaggacaagattaaagccatgatatctcagtccaatcat
gaatatgacccaatgcattactccaagaaggcggttggacctccacctgctcactatacc
tgctttcgttgtggaaaagctggtcactacattcggcagtgccccttgctgatgatccag
gataagagtgtggagggcaccaagccggtgaggatcagtaagggcattcctcagagcttc
atggtgaaggtagagccgggcaccaaaggggccatgttgaccagcactggagaatatgct
atacctgcgatagatgcggaggcatatgcacaaggaaagaaggagcgccctccgtttgtt
ccacatgaccagtcttcatctgaggacgatacagacccgatccccgatgaactcctgtgt
cccatttgcaatgacctgatgaccgatgccgtggttataccgtgctgtggaaacagttac
tgcgatgattgtattaggacggccctgttggactctgaggagcacacctgcttcacatgc
aaacagtctgacgtttcacccgataatctcatcgccaacaagtttcttcgacaggcggtg
aacaactttaagaatgagacgggatacaccaaacatgttcgcaagcagctgcagaatgcc
gccccgcccccgcctcgccctcagttggtcaggccgctgcattcaagacagcaggaccca
ctgatggctcatatcgctcaccctccttccacaagcgcacccgccactgcccctccagta
caggccccgcccccagctcctgcaacagcccctacgtcagcccctgcacctgcacgagaa
ccctctcctgctccggctgcctctgctgctacttctgctcctacccctcctcatgctgct
gctactactgaagaacgagatgattcaccagcacctgctgccgaccaccattctcctatg
cactccaccagtcatggggagccacccccaccgggtgagacaaatccagaacctactgtg
agaccggactcatcaggaacctcaaactatcatttaaatgcaatgggtcacccaccacct
attagaccgcctcatccaccaggtcaccagtcccgaccacaccagcctctcagaggggga
ggcggcagaccgtgggagaggttttacagaggaagaggagaccacccatccactcacctc
ctcacagcgccaccgcctgcacctcaacctccagtgtacccagctccgtccatgtacccg
cccccgccccagtcctatccccccccctacacctctggccccggccttctccctcctgtc
atgggttaccaaccgcagcctatgtatgctcccggaccaccagggctaaacccaccctgg
gttcccccgggtacccagccccctcttatgcctttgccccccctcggtcagccccccctc
tctaaggaagatttctacagacagcggcacctccgacaggacaatgtcacatccaaactg
gatgaatttactaaagacttccacaaagagcttatgaagtacagaaatgcaccaaagaga
cggagaccatcgtattcaagatcccggtcatacagtcgctctccattcagccgctctcct
tactctcgctccagatccaggtcaagatcccggtcttactcttactctcccagtcgatcc
cgctcgcgctcccatggccggtcttatccccgctccccttactctagacgcaacggccgc
agctatggacgatcgcgctccaggtcccgctccaggtcttacgggtatcgtcgctctggt
tcaccgcgatcccctcccccgtaccgaccagggggctgggagggaccggaaggggcgggg
ccgtacaggtcgcggtctcgctcgcctggccccggtggcttcaggacccgcagccccggt
ggacgaaagccgcctcctcgagagctcccaccgtacgagctgaaaggtcctagtcctgga
ggcaatgagcgctgggaaagagagcggtatcggcagtgggagaaggagtatgccgattgg
tacaaccagtactacaaagactacgacaacccgcatacctcaatgcatcacagaggtcgc
gccagcagagaccgggagagggacaggatgtccccgttatcgagaaattactccccccag
gggagaggaaggcgaggaagagaggagagagggcctccccctaaccaacctccatcctct
tcctcatcaggggcgaagtccagcgctaaggtcctgaagccaaagaaagtcaaaaagaga
agaactggggacgaatccgagggatcgcatcagtccgttgaccgaggagatgcgactccc
gtcagagacgagccgatggacgaaatcccatccctcgttataacgtctcccatgtcctcg
aaggcttcagttggagccgcaacctctaaagctccagcttctaaaagcaccgctacaccc
gttaaaccctccaccaagtcaacatcaaagactccgtctgatcggagtaagaaagacaaa
ggccagaaggtaaaagctaaggtgaagacggagagcgtgaagggaaagagtgaaaagggg
aagaaaaggcccggagaaggtgtggctaccaaaaaagactcctcgtcctcctcctcctct
ggcacaaaacctctaaaggccattaaaaccaaaccagaagacccccccaactccacccct
aaaaaggaaaaggctaagagcgctgcagtaaggccaggcctccttaagaccccccctcag
tcctgccagagcctgccgctgcaccattcaacacttcacgacggccctcgatctggccac
gacatgcgggggagaagagaccttcctcagggtggtgggctccttcccaccccccatcaa
cacgggctgcagctcctccacaggcctccctcccccgacactcggcggaggatgggagag
gagggccgctctttgctcggaccccctcccggaaagctgaggagaatagacgggctagtg
gttggatgtgatgtcctctcccactcgcacatctctcatcagcccccgctgcacagactg
ccacccccctcagacaggccgggtctccttcccatacccgggagccgtgatatgggccga
ggagatgcggatcgaggatccatcagacctctgatggaccttcaggtgaagccactgacc
cagaggaggatcaagttgaacagagacttgggcagaaagagcagcaccgggacgcccgcg
gacagggcgccctctgcttccgagaagaccacctccacctcagaccgatcggccactgct
aacctctccgaaggagaccgtcccgtcagcacggcggacggggctcttagaaaggagcgc
tcggcatctgcagagaggggagtctgcagagacagaccaggaagtgctggagagagaccg
cagggttcagacagggagccgagtagaagctcaggactggaccgagagcgggaccgagcc
tcaggatccgaccgagccgtgatgtctgacagagacagggaacgggaacgggacagagac
agggatcgggaacgggacagggacagggacagggtctccagctcccagaaaatggctgtt
accgtggagagagacctcgaaggagagaggtcgacgagggccgagcgaaagagctccagc
gcgggagggaggtccgtctctctggataaaatgaccatcgcggagaagtcgtcgtcctct
aagagctcgacggacgctgaggagaagccgagcacctcgtctaaggagaggggcgacggg
tcagagcgatctgctaaatcccacaggagtgcgtccaaggacaaaactgagaggagtgtc
ccctcaggagagaagccagctgccgcccacagagaagcagtgaaagatgcagaggagccg
tctgtgaagagtaaacccaggatcagcagaaaggccccgacgagccacaccgccagctcc
tccaggtctgctcaagaaacaaagcgagactctgacaaggatcagaagagtgcatcctcc
aaacctgcagagcagctcccgcccagccccgtgaagagcatcagcccggagcccgtcgcc
cacagcgaggagccgctcattcagcctcctcctcgctccaagtgggaaagggaggacgat
gaagaaggcctggagaatgggcccagtgcgcccaaggagccctcacctgtgccacagagg
agccgaggcaaagaagggcagactgaggcacctaaaccggtgaggagtgaaggccgagag
tcttcccgggaggagaggcgaggaccggcgagagaggagaagaaagggagagcgccgagg
gaggagggccgaggtggcaggacggcacagacgagttccgacaaaccgagcaaggctaaa
cttgttagggaggagggcagaggagggcgagaggaagggagagctgcagccagagaggag
ggccgaggtggagcgagagacgaggtgcggggggcgtcggcgaaggaggagagagccgca
gaaggccgaggaggaggaggaggaggacgagaggagagccgcggcctggagcccaggaga
cagcgattgtgctcggacctcggcctcgccaccgacgaagcggccttcgtgcccgactac
agcgagggcgagggctccgaggcggagagagggaggagcggcagcgccagtctgtccgcc
agccagccctccagccccacccagagcgcccacagcggctcggcggccgccagcgccgcc
accgcggcggacaagaagaagaagaaacacaagaaacataagaaacacaagaagcacaag
aagcacggcccgcatatcaaggagggagaacacaaggagaacaagcacaaacacaagaag
aagaaacacaaaaagagcaaagacaaagatgtggaggaagaggagaggccggagaaagcc
gtggaagggtctccacactaa
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integrated database retrieval system
