Pungitius pungitius (ninespine stickleback): 119217388
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Entry
119217388 CDS
T07626
Symbol
tmc5
Name
(RefSeq) transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119217388 (tmc5)
03037 Cilium and associated proteins [BR:
ppug03037
]
119217388 (tmc5)
Transporters [BR:
ppug02000
]
Other transporters
Pores ion channels [TC:
1
]
119217388 (tmc5)
Cilium and associated proteins [BR:
ppug03037
]
Other cilia and associated proteins
Stereociliary proteins
119217388 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
119217388
NCBI-ProteinID:
XP_062420621
LinkDB
All DBs
Position
9:complement(10011134..10020757)
Genome browser
AA seq
963 aa
AA seq
DB search
MTSYGTGGLFNPAYHDSETLEIDRSKSLQANPYARVERADGLYSPGQTSADGSVGTVPLG
GWHEESRRAGESFPMGVTSSHPESAAWQRDTDHNRFPPDSLYDRSPPVRLSSAMSGNLTM
RWRGLTMRRMSMFPSGDPANEAFTADAIRNEMENEEQNLVKELIALSTRDQIRAIRDLPM
TFEEKKHIRSQVLALKSSKRSRQFPCFADCSENVSLSFRRFGYSLSSARQTLQLWQGVMK
EIGGKFGTSVVIYFVFLKWLLMFNIFSFLVNFGFITIPLLVYDASPNIPANVSFSGLEIL
TGAGYFHYTVMYYGGYSNETLHGLGDYNMQLAYFFTISVYMVLCGIALIFNMGSSFMKNY
VLADPTSNGAWQLLCSWDFSITNERAVRQRKNNLRVQLKESLSEKAQRELLTLSEQLKHF
GIYLGSWLLSTGLAVGCGASIYYLCQYEQKQATDAANWSLLQDAKTLLVPFVVSLINLVV
PLFYSLFNKFEHYSSQRRQIYALVVRNVLLKMSILAVLCYYWMNVVAKRFSCWESIVGQA
LYRLVIVDFLFLMLGSFFGEFLSNVIGTRLLPRLGVPEFDVARNVLEIIYAQTLAWIGIY
FSPLLPAIQILKFFILFYLKKVSLIQNCQPPRRSGRAAQMQTIFMALLFFPFFVGALSMV
AYTAWSLSPSEQCGPFRGLNNTFSVVGVWMEDLEKIPGSQWAVWIYQNVIRSEIFYFFIS
LIIVVIIYIFWQVTQGRKQLIRLLKQRIVNEGKDKSFLLDKLQNLQKSQPDKSKQKNQKK
HSKQRRDDHSSTGHSNSNAMVQALLARQQLEQEEKTGSAGGVPVPSDISSSSALTQAMLA
RQRAEDQDADTQRPFSRAFAVAAQARQRDEYFSVGFPDTPIGTSSTSSKVTRDTQAGQRA
EEPPSSASSVMMQVMQARQRAEEEERPQWVPAPPQNSAPAGSSALIQAMLARQQAQNEYD
DGY
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttacggaactggaggattattcaaccctgcctaccatgacagcgaaactctg
gaaattgatagaagtaaaagcctgcaagctaacccctatgccagggttgagagggcagac
ggactctactcgcccggtcaaaccagcgctgatggctctgtggggacagtgccactgggg
ggctggcatgaggagagccgcagggcgggagaaagcttccccatgggcgtcacctcatct
cacccagagagtgctgcgtggcagcgtgacaccgatcacaataggttccccccagactct
ctgtatgatcgatcacctcctgtgcgcctttcttctgcaatgtcaggtaacttgacgatg
agatggaggggactaacaatgagaagaatgagcatgtttcctagcggggaccctgccaac
gaagccttcacagcggatgccatcaggaacgagatggagaatgaggaacagaacctagta
aaggagctcattgctttgtcaacacgagaccaaattcgagccattcgggatcttccaatg
acctttgaggagaagaaacatatcaggagtcaagtgctggcgttgaagtcttcgaagcga
tctcgccagtttccatgttttgcagattgctctgagaatgtgtcactgtctttccgcagg
tttggctacagtctgagttcagccaggcagaccctgcagctttggcaaggcgtcatgaaa
gagatcggtggcaaattcggcaccagtgtcgtcatctatttcgtgttcctcaagtggctg
ctcatgttcaacatcttctcattcctggtcaactttggcttcatcaccatcccgctgctt
gtttacgacgcttcccccaacattcctgccaatgtgagcttcagcggactggagatacta
actggagctggttacttccactacactgtcatgtactacggtggctacagcaatgaaacc
ctgcatggccttggggattacaacatgcagttggcctatttcttcaccatttccgtctac
atggttctgtgtggaattgcacttatcttcaacatgggcagctcattcatgaaaaactac
gtcctggcagacccaacatcaaacggtgcatggcagcttctatgcagctgggacttcagt
attaccaacgagagagcagtgagacagcgcaagaacaacctacgcgtccaactcaaggag
tccttatcagagaaggcccagagggagctgctgaccctctcggaacagctgaagcacttt
gggatttatttgggttcatggctcctctccaccggcttggctgttgggtgtggagctagc
atctattatctctgccaatacgaacagaagcaggcaacagatgccgccaactggtctctg
cttcaggatgcaaagactctcctggttccctttgtggtgtctctaatcaacctggtggtc
ccactcttctactcactcttcaacaagtttgaacactactccagccagcgcagacagatc
tacgctctggtagtcagaaacgtgcttctcaagatgtccattctggcagtcttgtgttat
tactggatgaacgtggtggcaaagcggttttcatgttgggagtccattgtgggacaggct
ttgtaccgtctggtcattgttgatttcctttttctgatgttgggatccttcttcggagag
tttcttagcaatgtgattgggactagattacttcctcgtctgggagttccagagtttgac
gtggccagaaatgtccttgaaatcatctacgcacagactctggcatggattggaatctac
ttctctcctctgctgcctgccatccaaatcctcaagtttttcattttgttttacttaaag
aaggtcagcttgatccagaactgccagcctccccgacggtcggggagagcagctcagatg
caaaccatcttcatggccctcctcttcttccctttctttgtgggagccctgtccatggtt
gcatacactgcctggagcctgagtccctcggagcagtgcggcccttttcgaggactcaac
aacaccttcagtgtggtaggagtgtggatggaggatttggagaagatccccggttctcaa
tgggccgtctggatctaccaaaatgtcatcagaagtgaaatcttctacttttttatctca
ctcatcattgttgtcattatatacatcttctggcaagtcactcagggccgcaagcaactt
attcgtctactgaaacaacggatagttaatgaggggaaagacaagtccttcttgttagat
aagcttcagaacctccaaaaatcccaacccgataaatccaaacagaagaatcagaaaaag
cactccaaacagcgtcgggatgaccactcctctaccggccattccaactcaaatgccatg
gttcaggcgctactcgctcgccagcagcttgaacaggaagaaaagactggcagcgctggt
ggagtgcccgtcccctccgacatctcctcctccagcgcgctcactcaggccatgttggcc
cgccagcgagccgaggaccaggacgcagacacgcagcggccgttctcaagagccttcgcg
gtggccgcgcaggccaggcagagggatgaatacttcagcgtgggttttcctgacacccca
atcggcacgtccagcacgtccagcaaggtcacacgggatacgcaagccgggcaaagagcg
gaggagccgccgtcctccgcttcaagtgtcatgatgcaagtcatgcaggccagacagaga
gcggaggaagaggagaggcctcagtgggtgccagctcccccacagaactcagcgccagca
ggctcgagtgctctcatacaggccatgttggcccggcaacaggcccagaacgagtatgat
gacggttactga
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