Pungitius pungitius (ninespine stickleback): 119217395
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Entry
119217395 CDS
T07626
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04517
IgSF CAM signaling
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119217395
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119217395
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119217395
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119217395
Intermediate filaments
Intermediate filament-binding proteins
119217395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
119217395
NCBI-ProteinID:
XP_037326849
LinkDB
All DBs
Position
9:21570971..21592913
Genome browser
AA seq
2337 aa
AA seq
DB search
MTTVAADLDHLELQQQYSSNDTVNNRWDEEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYMDLRDGRMLIKLLEVLSGERLPKPTKGRMRIHCLENVDKA
LQFLKEQRVHLENMGCHDIVDGNHRLTLGLIWTIILRFQIQDISVETEDNKEKRSAKDAL
LLWCQMKTAGYSNVNIRNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHYNLQNAFN
LAEQHLGVTQLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAIE
TEKMVEKYESLASDLLEWIEQTIIILNNRKFANSLVGVQQQLQAFNTYRTVEKPPKFTEK
GNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKAWERLEKAEHERELALRMELIRQEK
LEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLQAVDAATKKHEAIETDIAAYEERVQ
AVVSVAKELEAELYHDIKRITARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEMLY
IMDWMDEMKMLLLSQDYGKHLLGVEDLLQKHALVEADIAIQADRVKAVGTNATKFSVNND
GYKPCNPQVIQDRVSHLEFCYQELTQLAAERRVHLEESRRLWKFFWEMAEEEGWIREKEQ
ILSSVEHSKDLTGALRLLSQQRALEDEMSGRAGHLKHTIVEGRAMVQSDHFAATKIQERM
DDLQAQWAALEQLAAARRKRLEEALALHQFQVDADDVDAWTLDALRIVSSGETGHDEFST
QALFRKHKDASAEVASYRPVIDSLHEQAALLPQEEAESEEVRRRLAGIEERHKEVTELTK
LRKQALHDALARYKMFSEANACEVWIEEKEQWLNSLEIPEKLEDLEVVQHRFESLEPEMN
NQASRVAVVNQIARQLVHNGHPSEKDIRTQQDKLNNRWSQFRNLVDQKKESLNSALGVQN
YHLDCNETKSWIKEKTKVIESTQELGNDLTGVMALQRKLSGMERDLTAIEDKLRHLQGEA
ERLAEEHPDQAKAITGRLAEITSVWEEMKNTLKNREESLGEARKLQQFLRELDDFQTWLS
RTQTAIASEDMPNTLAEAEKLMAQHEGIKNEIRNYEEDYQKMRDMGDTVTQGQTDAQHMF
LRQRLQALDTGWNELHKMWENRQNLLAQSHAYQLFLRDTKQAEAFLNNQEYVLAHTEMPT
TLEGAEAAIKKQEDFMTTMDANEDKINGVVEAGRRLASDGNINSERIQERVGSVDDRHKK
NREAATELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMTYDEARNLHSKWLKHQAF
MAELQSNKEWLDKIQKDGMLLVSEKPETEVVVKEKMAGLHAMWEELESTTQTKAQCLFDA
NKAELFTQSCADLDKWMGGLEGQIQSDDYGKDLTSVNILLKKQQMLEKQVEVRQKEVVEL
QTQVKALGQEVKDTDEVNSRRQLVEMKFQELLEPLRCRKNFLVESREIHQFNRDVEDEIL
WVQERMSMVTSSDHGHNLQTVQLLIKKNQTLQKEIQGHQPRIDDILERSRGLLKDVVRQR
LEDLQELWRRLMEEAELRHGRLEEAHKAQQYYFDAAEAEAWMSEQELYMMSEEKAKDEMS
AVTMQKKHQIVEQAAEDYAETVHQLSKTSRGLVTDGHPESERIGMRQSQVDKLYAGLKDL
SEERRGKLDERLRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARD
TGNIGQERVDAVNRLADELINAGHGDAATVAEWKDGLNEAWADLLELIDTRTQILAASFE
LHKFYHDAKEILGRILDKQKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQVRQLQDD
AVRLQSAYAGDKADDIQRRESEVLESWRSLLEACDGRRLRLLDTGDKFRFFSMVRDLMLW
MEDVIRGIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLARKHYASG
EIKEKLLQLTDKRKEMIDKWEDRWEWLRLILEVHQFSRDAGVAEAWLLGQEPYLSGREMG
QSVDDVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRLQEEEERMRRPPSPEPV
VVLEEEPQQHSGLITQNGLPSDQDSPRDGGEKGDLVNGVCQRSSKEPSPGASPTSSRKSK
TSQSSTLPPKGQDPPPQLEGLLHRKHEWEAPNKKASNRSWHHVFCVLTNHELGFYKDSKA
ATQGAHYHNQAPVSLREAACDVASEYKKKKHVFKLRVTDGNEFLFQAKDEEEMSTWIQAI
LNAGADRPDPAGSGPGTPASGRSQTLPLGGDSSPGKREKDKEKEKEKRFSLFSKKKQ
NT seq
7014 nt
NT seq
+upstream
nt +downstream
nt
atgacgacggtcgctgccgacttggatcacctggagctgcagcagcagtacagcagcaac
gacacggtcaacaaccgctgggacgaggagtgggacaacgagaacagctcggcccgcctc
tttgagcgctcccgcatcaaagcgctggcagatgagcgggaggcggtgcagaagaagacc
ttcaccaaatgggtaaactctcacttgtccagagtctcctgcaggatcacagacctctac
atggacctgagagacggacgaatgctgatcaaactgctggaggtcctgtcaggggagagg
ctgccaaagcccaccaaaggccggatgcgtattcactgtctggagaacgtggacaaagct
cttcagttcctgaaggagcagcgggttcacctggagaacatgggttgtcacgacattgtg
gacgggaaccatcggctgactctgggcctcatctggaccatcatcctccgcttccagatt
caggacatcagtgtggagaccgaagacaacaaagagaagagatctgctaaagacgctctg
ctgctttggtgtcagatgaagacggccggatattccaacgtgaacatccgcaacttcagc
accagctggagggacggcatggccttcaatgctctcatccacaaacacagaccagatctg
attgattttgacaaactgaagaaatccaacgctcactacaacctgcagaacgctttcaac
ctggcagagcagcacctgggcgtcacgcagctgctggacccagaggatatcagcgtggac
catcctgatgagaagtctgtcatcacctatgtggtgacgtattaccactacttttccaag
atgaaagctctgaaggtggaaggcaaacgcatcggaaaggtgttggataacgccatcgag
acggagaagatggtcgaaaagtacgagtctctggcctcagacctgctggagtggatcgaa
cagaccatcatcatcctcaacaacaggaagttcgccaactctctcgttggtgtccagcag
cagcttcaggccttcaacacctaccgaactgtggagaaacccccaaagttcacagagaag
gggaacctggaggttcttctgttcaccatccagagtaagatgagagccaacaaccagaag
gtctacatgccccgagagggaaaactcatctccgatatcaacaaggcctgggagcggctg
gagaaggcggagcacgagagggagctggctctgaggatggagctgattcgtcaggagaaa
ctggagcaacttgccaggcgcttcgaccgcaaggcggccatgagggagacttggctgagc
gagaaccagcgcctggtgtcgcaggacaactttggttttgacctccaggccgtcgacgcg
gccaccaagaagcacgaggccatcgagacggacattgcggcgtacgaggagcgcgtccag
gctgtggtctctgtggcgaaggagctggaggcggagctctaccacgacatcaaacgcatc
acagccaggaaggacaacgtgatccggctgtgggagtacctgctggagctgctgaaggcc
cgcagacagagactggagatgaacctgggcctgcagagagtcttccaggagatgctctac
atcatggactggatggatgagatgaagatgttgctgctgtctcaggattatggcaagcat
ctgttaggcgttgaagacctgctgcagaaacacgccctggtggaggctgacatcgccatc
caggctgaccgggtgaaggccgtcggcaccaatgccaccaagttctcagtcaacaatgac
ggctacaagccctgcaaccctcaggtcatccaggaccgggtctcccacctggagttctgc
taccaggaactgacccagctggccgctgagcgccgcgtccacctggaggagtcccgccgc
ctgtggaagttcttctgggagatggccgaagaggaaggctggatccgtgagaaggagcag
atcctgtcctctgtggagcacagcaaggacctgacgggggcgctgcgcctccttagccag
cagcgcgctctggaggatgagatgagtggtcgcgccggccacctcaagcacaccattgtg
gagggccgggctatggtgcagagcgaccacttcgctgccaccaagatccaggagcgcatg
gatgacctgcaggcccagtgggcggcgctggagcagctggcggcggcgaggaggaaaagg
ctggaggaggcgctggctctgcaccagttccaggtcgatgcggatgatgtcgacgcctgg
acactggacgccctgcgaatcgtctccagcggagagacgggccacgacgaattctccacc
caggccctcttcaggaagcacaaggacgcctcggcggaggtggccagctaccggccggtc
atcgactccctccacgagcaggccgccctgctgcctcaggaggaggctgagtcggaggag
gtgcggcgacgtctggccggcattgaggagcgccacaaggaggtgaccgaactgacgaag
ctgaggaagcaggccctgcacgacgctctggcacgctacaagatgttcagcgaggccaac
gcctgtgaggtttggatcgaggagaaggagcagtggctgaacagcctggagatccccgag
aaactggaggacctggaggtcgtacagcacaggttcgagagtctggagccggagatgaac
aaccaggcgtcccgtgtggccgtggtgaaccagattgctcggcagctggtgcacaatggc
cacccgagtgaaaaggacatcaggacgcagcaggacaaactcaacaaccgctggagccag
ttcagaaacctggtcgaccagaagaaagagtccctgaactctgctctgggcgtgcagaac
taccacctggactgcaacgagacaaaatcctggatcaaggagaagaccaaagtcatcgag
tccactcaggagctgggcaacgacctcaccggggtcatggccctgcagcgcaaactgagc
ggcatggagcgcgaccttaccgccatcgaggacaaactgcgccacctgcagggcgaggcc
gagcggctggccgaggagcaccccgaccaggccaaggccatcacgggccgtctggccgag
atcacctccgtctgggaggaaatgaagaacaccctgaagaaccgagaggagtctctgggc
gaggcccggaagctgcagcagttcctgcgcgagctggacgacttccagacctggctgtcc
cgcacgcagacggccatcgcctccgaggacatgcccaacactctggcggaggccgagaag
ctgatggcccagcacgaaggcatcaagaacgagatccggaactacgaagaggactaccag
aagatgcgggacatgggggacacggtgacgcagggccagacagacgctcagcacatgttc
cttcgacagaggctgcaggcactcgacaccggctggaacgaactgcacaagatgtgggag
aaccggcagaacctgctggcccagtctcatgcctatcagctgttcctcagggacaccaag
caggccgaggccttcctcaacaaccaggagtacgtcctggctcacaccgagatgcccacc
accctggaaggcgcagaggccgccatcaagaagcaggaggacttcatgaccaccatggac
gccaacgaggacaagatcaacggcgtggtggaggccggcaggcggctggccagcgacggg
aacatcaacagcgagcgcatccaggagagggtcggctccgtcgacgacaggcacaagaag
aaccgcgaggcggccacggagcttctgatgagactgaaggacaaccgagatctgcagaag
ttcctgcaggactgccaggagctgtctctgtggatcaatgagaagatgctcacggctcag
gacatgacctacgacgaggccaggaacctgcacagcaagtggctgaaacaccaggccttc
atggccgaacttcagtccaacaaggagtggctggacaagatccagaaggatgggatgctg
ttggtgtcggagaagccagagacggaggtggtggtgaaggagaagatggcggggctccac
gccatgtgggaggagctagagtcgaccacgcagaccaaagctcagtgtctgttcgacgcc
aacaaggccgagctgttcactcagagctgcgcagacctggacaagtggatgggaggcctg
gagggtcagatccagtccgacgactacggcaaagacctgacctccgtcaacatcctgctg
aagaaacaacagatgctggagaagcaggtggaggtgcggcagaaggaggtggtggagctg
cagacccaggtcaaggctctgggtcaggaggtgaaggacactgacgaggtgaacagtcgg
aggcagctggtggagatgaagttccaggagctgctggagccgcttcgctgcaggaagaac
ttcctggtggagtccagagaaattcaccagttcaaccgagacgtggaggacgagatcctg
tgggttcaggagaggatgtccatggtcacgtcctccgaccacggacacaacctgcagacg
gtgcagctgctcatcaagaagaaccagactctgcagaaggagatccagggccatcagcct
cgtatcgacgacatcctggagcgcagccggggcctcctgaaggacgtcgtccgccagcgc
ctggaagacctgcaggagctgtggaggcggctgatggaggaggcggagcttcgccatggc
cggctggaggaggcacacaaagcccagcagtactactttgacgcggccgaggccgaggct
tggatgagcgagcaggagctgtacatgatgtcggaggagaaggccaaggacgagatgagc
gccgtcaccatgcagaagaagcatcagatcgtggagcaggcggcggaggactacgccgag
accgtccaccagctgtccaagaccagcagaggactggtgacggatggacaccctgagagt
gagcggatcggcatgcgccagtctcaggtggataaactgtacgccggcctgaaggaccta
tcggaggagaggcggggcaaactagacgagaggctccgcctcttccagctgaaccgcgag
gtggacgacctggagcagtggatcgctgagcgcgaggtggtggccgggtcacacgagctg
ggacaggactacgagcacgtcaccatgctgcaggagcgattccgcgagttcgcccgggac
accgggaacatcgggcaggagcgcgtggacgccgtcaaccggctggcggacgagctcatc
aacgccgggcacggcgacgcggcgacagtagcggagtggaaggatgggctgaatgaggcc
tgggccgacctgctggagctcatcgacaccaggacgcagatcctcgctgcctccttcgag
ctgcacaagttctaccacgacgccaaggagatcctgggacgcatcctggacaaacagaag
aagctgccagaggaggtgggccgagaccagaacacggtggagacgcttcagaggatgcac
accaccttcgagcacgacatccaggccctggggacacaggtgaggcagctgcaggatgac
gcagtgcgtctccagtcggcgtatgccggagacaaagcagacgacattcagcggcgggag
agcgaggtgctcgagtcctggaggagtctgctggaggcctgcgacggacggaggctccgc
ctcctcgacaccggagacaagttcaggttcttcagcatggttcgggacctcatgctgtgg
atggaggatgtgatccggggcatcgaggcccaggagaaccccagagacgtctcctctgtg
gagcttctcatgaacaaccaccagggcatcaaggccgagatcgatgcccggaacgacagc
ttcaccgcctgcatcgagctggggaagagcctgctggctaggaagcactacgcctcgggg
gagatcaaagagaagctcctgcagctgacagacaagaggaaagagatgattgacaagtgg
gaggaccgatgggagtggcttcgactcatcctggaggtgcaccagttctcccgtgacgcc
ggtgttgccgaggcctggctgctgggtcaggagccctacctgtcaggtagagagatgggt
cagagcgtggacgacgtggagaagctcatcaaacgccacgaggccttcgagaagtcggcc
gccacctgggaagagcggttctctgctctggagaggctgaccacgctggagctgctggag
gtgaggaggctgcaggaggaggaggagaggatgaggaggccaccatctccagaacctgtt
gtggtgctggaggaggagcctcagcagcacagcggcctcatcactcagaacgggctccca
tcggaccaggactctccccgggacgggggggaaaaaggagatctggtgaacggcgtctgc
cagcggagctccaaggagccaagtcctggcgcctcgccgacctccagcagaaagagtaag
accagccagtcctccacgctgccccccaaaggccaggaccccccccctcagctggagggt
ctcctgcaccgcaagcacgagtgggaggcccccaacaagaaggcctccaacaggtcgtgg
caccacgtgttctgcgtccttaccaaccacgagctgggcttctacaaagacagcaaggcc
gcgactcagggagcccactaccacaaccaggcccccgtcagcctgagggaggccgcgtgt
gacgtagcctcagagtacaagaagaagaaacacgtcttcaaactccgagtgacggatgga
aacgagtttctgtttcaagccaaagatgaagaggaaatgagcacctggatccaggccatc
ctgaacgccggcgccgaccggcctgacccggcgggtagcggccccggcacgccggcgtcg
ggccgctctcagactctgcccctcggtggcgactcgagtcccggcaagagagagaaggac
aaggagaaggagaaggagaagcgcttcagtctgttcagcaagaagaaacagtag
DBGET
integrated database retrieval system
