Pungitius pungitius (ninespine stickleback): 119217465
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Entry
119217465 CDS
T07626
Symbol
herc3
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119217465 (herc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119217465 (herc3)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119217465 (herc3)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
HECT type E3
119217465 (herc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
119217465
NCBI-ProteinID:
XP_037327022
LinkDB
All DBs
Position
9:15612396..15626554
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AA seq
1048 aa
AA seq
DB search
MLCWGNAKDGQLGIGIDRSPMFEPRNCHVFSGKGLKEVACGGQHSMFLLHDGSVYTCGSN
SCGQLGHSKPGTSPELVGALDTQIITMVSSGQSHSMAVNEEGQVFAWGAGEEGQLGLGTA
EATVRIPRLVKRLCEQRIAQVMCGNQHCIALSRDGQLFTWGQNTSGQLGLGKGEPSKLFP
HPLKSLSGIPLAQITAGGDHSFALSLSGAVFGWGKNRAGQLGLNDEQDRAVPCHIKFLRS
QKVCYISCGNEHTAALTKDGGLFTFGEGSWGQLGHGSTNNELLPRRVLELMGSEVSQITC
GRRHTLAFVPSSEVVYAFGCNSHGQLGTGLLGDARSPCPVKASFLTGSSHRTGSKQCTVT
KIICGGDHSFLLYSNDQSSVPAEDFRVIGVSKSVSPINCERINSWRLKLMYNTDSTVTND
IIIQLSSTACWNASFLDQSDDTHFKTNPKISGIDLNSVRKLFDTLSKPAFSGLLEQATKS
FESLLIPQLPRSPPDVEAMRIYLILSEYPGLFDSKNYIRLTIPLAMAILRLDANPSKVLD
NWWCFVDDRLFTRMVDMYKSIVVFMLTGGRTLLVPVFYENYFVATLRLLEKLHKVNLKAR
HVEYNRFYIPDITSLVDIQEDYLKWFLNKADIKISSSPSEGDFPSVNLCAYPFILNARAK
TTMLQTDAELQMQIAVSGANLHNVFMLLTLEPQFARNPYLVLHVRRDHLVSDTLRELTMY
SDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDPVYGMFTHYKESNLLWFSDKCF
VEQNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLNVSPTLDDFKELSPTEARSLQHLL
DYDGGDVEETFLLNFAITRENYGMTEVKELIPGGEGVSVDKNNRKEFVEAYLRYVFSASV
SEQYSAFSSGFLKVCGGEILPLFQPSELMAMVVGNNNYNWEEMEKNAVYKGEYTATHPTV
RLFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMESLRIAIQSTTAEEHYLPVAHTCYNLL
DLPRYQTKETLRRRLTRAVEQYEGFSLV
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgctctgttggggaaatgcaaaggacggacagctgggtatcggtattgacaggagcccc
atgtttgagccgagaaactgtcacgtgttcagtggcaagggactgaaagaagtagcttgt
ggagggcaacactcaatgttcctgctgcacgatggcagtgtgtacacatgtggttctaac
agctgtggacagctgggccacagcaaaccagggacttccccagagcttgtgggagctctg
gatacacagattataacaatggtgtcgagtggtcagtcccattcaatggccgtgaacgag
gagggtcaagtgtttgcatggggagctggagaagagggccagctcggcctcgggactgcg
gaggcgaccgttcgaatcccgcggttggtcaaaaggctgtgtgagcagcggatcgctcaa
gtaatgtgtgggaaccagcactgcattgcactttctagagatggccagctgttcacgtgg
ggccagaacaccagcggccagctcggcctgggcaaaggagagcccagcaagctgttccct
cacccactgaagtctctgtcgggtattcctctggcacagataaccgccgggggagaccac
agctttgctctctccttgtcgggggctgtgttcggttggggcaagaacagagctggacag
cttggtctcaacgatgaacaagatcgagcggtcccgtgtcatatcaaatttttgagatct
caaaaagtttgttatatcagctgtggaaatgaacatacagcagccctcacaaaggacgga
ggcttgtttacatttggcgagggctcgtggggtcagctgggtcacggctccaccaataat
gaacttctacccaggcgagtgctggagctcatgggctccgaggtgtcccagatcacctgt
ggcaggcgccacacgttggccttcgtgccgtcttctgaagtggtgtatgcatttggttgc
aacagccatgggcagctgggcacgggactactgggagatgccaggagcccgtgtccagtg
aaggccagtttcctgactggaagttctcacagaacaggatcaaaacaatgtacagtgacc
aaaataatctgtggtggagaccatagcttcttattgtactccaatgaccagagttccgtc
cccgcagaagacttcagagtcattggtgtcagtaaatcagtctcccccatcaattgtgaa
agaataaattcatggaggttaaagctgatgtacaacacagattccactgtcacaaatgac
attataattcaactctcctctacggcttgttggaacgccagctttttggaccaaagtgac
gacacacacttcaaaaccaaccccaagatctcgggcatcgatctcaactcggtcagaaag
ctgttcgacacgctcagcaaaccggcgttctctggacttctggagcaggccaccaagagt
tttgagagtctgttgatccctcagctgccgcgctcccctcccgacgtggaagccatgagg
atctacctcatcttgtccgagtacccgggcctgtttgactccaagaactacatccgcctc
actatccccctggcgatggccatcctccggcttgacgccaaccccagcaaagtattggac
aactggtggtgcttcgttgacgaccgcctgttcaccaggatggtcgacatgtacaagagc
atcgtggtgtttatgctaacgggaggcaggacgctgctcgtaccggttttctacgagaac
tatttcgtcgccactctaaggctgctggagaaactccacaaggtaaacttaaaggcccgc
cacgtggagtacaaccgcttttatatccccgacatcaccagcctggtggacatccaggaa
gactacctcaaatggtttctgaataaagctgacattaaaatatcatcctccccttcagag
ggggactttccctcagtgaacctatgtgcctacccgttcatactgaacgcacgagccaag
acgaccatgttgcaaacggacgctgaactgcagatgcagatagcagtgagcggcgcgaac
ctccacaacgtcttcatgctgctcacgctggagccccaattcgccaggaacccttacttg
gttttgcatgtgcgcagggaccatttagtaagcgacacgctgcgagagctcaccatgtac
tctgacgtggacctcaagaaaccactcaaggtgatctttgacggagaggaggccgttgat
gcaggtggagtgacaaaggagttcttcctgctgctgttgaaggagctgatggatcctgtg
tacgggatgttcactcattacaaagagtccaacctgctgtggttctcagacaaatgtttt
gtcgagcagaactggtttcacctgatcgggatcatctgcggtctggccatctacaactcc
actgtggtggacctccacttccccctggtcctctacaagaagctgctcaacgtgtcgccg
accctggatgacttcaaggagctgtcccccaccgaggccaggagtctacagcatcttcta
gactatgacggaggtgatgtggaggagacgtttctgctcaactttgctatcaccagggag
aactacgggatgacagaagtcaaggaactcattcctggaggagaaggcgtcagtgtggac
aaaaacaacaggaaggagtttgtggaggcctacctgcgctacgtgttctcagcctctgta
agcgagcagtactcggccttctcctccggcttcctgaaggtgtgcggcggggagatcctg
ccgctgttccagccgtctgagctgatggccatggtggtgggcaacaacaactacaattgg
gaggagatggagaagaatgctgtctacaaaggggaatacacagccacccacccaaccgtc
agattgttctgggaagttttccacgagttccctctggagaagaagaaacagttcttgttg
ttcctgaccggcagcgaccgcatccccatccacggcatggagagcctgcgtatcgccatc
cagtccaccacggcggaggagcactacctgccggtggcccacacctgctacaacctgctg
gacttgccccgctaccagaccaaagagaccctgcgccgccgcctcactcgggccgtggag
cagtacgagggcttcagcctggtctga
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