Pungitius pungitius (ninespine stickleback): 119217501
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Entry
119217501 CDS
T07626
Symbol
lrrtm1
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
119217501 (lrrtm1)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_9
LRR_5
LRR_14
LRR_LRWD1
LRRNT
DUF4750
HemY_N
EphA2_TM
Sigma_reg_N
Motif
Other DBs
NCBI-GeneID:
119217501
NCBI-ProteinID:
XP_037327080
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Position
9:12253592..12259583
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AA seq
525 aa
AA seq
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MLMDFLLIGLYLKWPLKKPPGLILCLLGIFLKTVPSVEGVCPRLCRCDSKLLYCEGLNLT
DIPRNLSSAMGLSMRENNLTELREGQLVSLSQLTWLYLDHNNIDIVEEGAFDRLRRVKEL
DLSSNRIDSLPNGTFRPLPNLRILDLSYNRLQALEPDLFHGLRKLTNLHLRYNVLKFVPV
RIFQDCRSMQFLDLGYNQLQSLARNSFAGLFKLTELHLEHNELVKVNLAHFPRLISLRTL
YMHNNRATVVVNTLEWTWHFLEKVDLSANEIESMEPHVFESAPNLKVLMLDSNRLTSVDQ
RILDSWSSLESVTLAGNEWECSRNVCALASWLSAFRGQRDNTLLCSSPDTAQGEDVLDAV
YAFQLCEDPPMEATTAGLYASTRDRPQGGSVFLGPFTPNPYEGEGGEVVTSSFTVTVGHD
DLENTMQIHKVVTGTMALIFSFLIIVLMLYVAWKCFPAGIRQLRQCFSSQRRKQKQKQSM
QQMAAISTPEYYVDYKPNHIEGALVIINEYGSCTCQQQPSRECEV
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgctaatggatttccttctaattggactgtacttaaagtggccactgaaaaagccccct
gggttgatactgtgtttgttggggatttttctcaaaacggttccctcggtagagggggtt
tgtccaaggctgtgccgctgcgacagcaagctgctgtactgcgaggggctcaacctcaca
gacattccccgcaatctgagcagtgccatgggcctgtccatgagagagaacaacctaacc
gagctgcgtgaaggccaactggtcagtctgtcacagctcacctggctctatctagatcac
aacaacattgacattgtagaggagggtgcttttgacaggctaagacgggtcaaggagttg
gacctcagcagcaaccggattgacagtctgccaaatggcacctttaggcccctccccaac
ctgcgtatcctggacctctcgtacaacaggctgcaagcactagagcctgatctgttccac
ggccttagaaagctcaccaatttgcatttgcgctacaatgttttgaaatttgtgccagtg
cggatttttcaggattgccggagcatgcagtttctggacttgggatacaaccaactgcag
agcctggcgagaaactccttcgccggcctcttcaagttgactgagttgcatcttgagcac
aacgagctggttaaagtgaacctcgcccacttcccccgcctcatctccttacgtacactt
tacatgcacaacaaccgcgccactgtcgtcgtcaacaccctggaatggacatggcatttt
ttagagaaggtcgacctgtcagccaacgaaatagagtccatggaaccacatgtttttgag
agcgcacccaacctcaaggtgctgatgctggattccaatcggttgacctctgtggaccag
cgcatcctggattcatggtcctctctggagagcgtaaccctggcagggaacgagtgggag
tgcagtcgcaacgtgtgcgccctggcctcttggctcagtgccttccgaggccagcgtgac
aacaccctgctgtgttcaagccccgacacggcgcagggcgaggacgtgttggatgccgtg
tatgcttttcagctatgtgaggatcccccgatggaggccactacagcgggcctgtacgcc
tccacgagggaccggccccagggcggctcggttttcctcggcccgttcaccccgaacccg
tacgagggcgagggtggcgaggtggtaaccagttctttcaccgtcacagtgggccacgat
gacctggagaacaccatgcagatccacaaggtggtgactggcaccatggcactcattttt
tcctttctcatcattgtgctgatgctgtacgtggcatggaagtgctttccagcaggaata
cgacaactgaggcagtgcttcagcagtcagcgccgtaagcagaagcagaagcaaagcatg
cagcagatggctgcgatttctactccggagtactatgtcgactacaaacctaaccacatt
gagggagctctggtcatcatcaatgaatatggctcttgcacttgccaacagcaaccttct
cgggaatgtgaggtgtga
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