Pungitius pungitius (ninespine stickleback): 119217513
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Entry
119217513 CDS
T07626
Name
(RefSeq) actin-related protein 2/3 complex subunit 1B-B-like
KO
K05757
actin related protein 2/3 complex, subunit 1A/1B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04144
Endocytosis
ppug04517
IgSF CAM signaling
ppug04530
Tight junction
ppug04810
Regulation of actin cytoskeleton
ppug05100
Bacterial invasion of epithelial cells
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119217513
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119217513
09144 Cellular community - eukaryotes
04530 Tight junction
119217513
09142 Cell motility
04810 Regulation of actin cytoskeleton
119217513
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119217513
05100 Bacterial invasion of epithelial cells
119217513
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119217513
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119217513
Membrane trafficking [BR:
ppug04131
]
Others
Actin-binding proteins
Arp2/3 complex
119217513
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Arp2/3 complex
119217513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_Aladin
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
RMC1_N
Gly_rich_2
Rax2
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Beta-prop_EML
WDR90_beta-prop_4th
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
SH3_3
Motif
Other DBs
NCBI-GeneID:
119217513
NCBI-ProteinID:
XP_037327100
LinkDB
All DBs
Position
9:complement(18157855..18162248)
Genome browser
AA seq
382 aa
AA seq
DB search
MAYHSFLLEPISCHAWNKDRTQIAMCPNNHEVHIYKKDGTQWTKIHELKEHNGQVTGIDW
ATDSNRIVTCGADRNAYVWSLKEGAWKPTLVILRINRAARCVKWSPQENKFAVGSGSRLI
SVCYFEQENDWWVCKHIKKPIRSTILSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVEEKP
GPTPWGSKMPFGEMLFESGGSGEAGQAAAGGGGGGWVHSVCFSHSGSRLAWTSHDSTVCV
AEGGKSGTVNSLSSESLPLLCVTFITENSIVAAGHDCYPALFVYDGARASLTFGGKLDVP
KQTAQKGISARERFQNLDRRASETQSTDKDLNTLHKNSISQISVLEGGRNKCTKFCTTGM
DGGLAIWDVKSLESAMKDLKIV
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atggcgtaccacagcttcctcctggaacccattagctgccatgcctggaacaaagaccgt
acccagattgccatgtgccccaacaaccacgaggtccacatctacaagaaggatgggacc
cagtggaccaagatccacgagctgaaagagcacaacgggcaggtgacaggtatcgactgg
gccacggacagcaaccgcatagtgacctgcggggcggaccgcaacgcctacgtgtggtcc
ctgaaagagggcgcgtggaagcccaccctggtcatcctcaggatcaaccgcgccgcccgc
tgcgtcaagtggtcgccgcaggagaacaagttcgccgtgggcagcggctcccgcctcatc
tccgtctgctactttgagcaggagaacgactggtgggtgtgcaagcacatcaagaagccc
atccgctccaccatcctcagcctggactggcatcccaacaacgtgctgctggcggcggga
tcctgcgacttcaaatgcagggtgttttccgcctacatcaaggaggtggaggagaaaccc
ggcccgaccccgtggggcagcaagatgccgttcggcgagatgctgtttgagtccggcggc
tccggggaggcgggtcaggccgcggcggggggcggaggcggaggctgggtgcacagcgtc
tgcttctcccactccggcagccgcctggcctggacctcccacgactccacggtgtgcgtc
gcggagggaggcaagagcggcacggtgaacagtctgagctccgagtctcttcctctgctg
tgtgtcaccttcatcaccgagaacagcatagtggcagctggccatgactgctacccggcg
ctgtttgtgtacgacggggcccgggccagcctgacgtttggtggcaagctggacgttccc
aagcagacggcccagaagggcatcagtgccagggagcgcttccagaacctggaccgccgg
gcctccgagacccagagcaccgacaaggacctgaacaccctgcacaagaacagcatcagc
caaatctcagtgctggaaggaggacgcaacaagtgcaccaagttctgcaccaccggcatg
gacggaggcctggccatctgggacgtcaagagtcttgagtctgcaatgaaggatttaaag
attgtctaa
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