Pungitius pungitius (ninespine stickleback): 119217540
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Entry
119217540 CDS
T07626
Symbol
stx1a
Name
(RefSeq) syntaxin-1A isoform X1
KO
K04560
syntaxin 1A
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
119217540 (stx1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119217540 (stx1a)
Membrane trafficking [BR:
ppug04131
]
SNARE
Syntaxin (Qa)
Stx-PM
119217540 (stx1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ATG17_like
PspA_IM30
ALIX_LYPXL_bnd
Ferritin
Spectrin_Anc-1
Lzipper-MIP1
FAN1_TPR
Laminin_II
GNVR
LMBR1
DUF6584
FUSC
DUF848
EsxC
EcoEI_R_C
ETRAMP
Motif
Other DBs
NCBI-GeneID:
119217540
NCBI-ProteinID:
XP_037327163
LinkDB
All DBs
Position
3:9977546..10015815
Genome browser
AA seq
287 aa
AA seq
DB search
MKDRMQELKHGKETTEEEDEVAVGMDKGFMDEFFEQVEEIRGFIESLAEKVEEVKRKHSA
ILASPNPDEKTKADLEDLMADIKKLANKIRSKLKSIQQTIEQEESQNKSTADLRIRKTQH
STLSRKFVEVMSEYNTTQSDYRERCKGRIQRQLEITGRNTTNEELESMLESDNPAIFTSG
IIMDNITEQAMNEIETRHTEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSKARRKKIMIIICCVVLGIVIASIVGGTLA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgcatgcaagaacttaaacacgggaaggaaacgacagaggaggaggatgaa
gttgccgtggggatggacaaaggattcatggacgaattctttgaacaggtggaggagatc
cggggtttcatcgagtctctggcagagaaagtggaagaggtgaaacggaagcacagcgcc
atccttgcctcccctaacccagatgagaaaactaaggctgacctggaggatctcatggca
gatatcaagaagttggccaacaaaatacgctccaaattaaagagtatccagcaaaccatt
gagcaagaagaaagccagaacaagtcaacagctgacctgagaatacgcaagacacagcac
tccacgctctcccgcaagtttgtcgaggtgatgtcagaatacaacaccacccagtcagac
tacagggagcgctgcaagggacgtattcagagacagctggagatcactgggagaaacaca
acaaacgaggagctggagagcatgttggagagtgacaacccagccatcttcacctcgggg
atcataatggacaacatcaccgagcaagctatgaacgagattgagacgcggcacactgag
atcatcaagctggaaaacagtatccgagagcttcacgacatgttcatggacatggccatg
ctggtggagagccagggggaaatgatagaccgcatagagtacaatgtggagcactcagta
gactatgtggagagggcggtatcagacactaagaaggcggttaaataccagagtaaagcc
cggaggaagaaaataatgattattatatgctgtgtggttttgggaattgtcatcgcttcc
atagttgggggaacgctggcctga
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