Pungitius pungitius (ninespine stickleback): 119217552
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Entry
119217552 CDS
T07626
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF2-like isoform X1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
ppug04137
Mitophagy - animal
ppug04144
Endocytosis
ppug04340
Hedgehog signaling pathway
ppug04350
TGF-beta signaling pathway
ppug04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
119217552
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
119217552
04350 TGF-beta signaling pathway
119217552
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119217552
04137 Mitophagy - animal
119217552
09144 Cellular community - eukaryotes
04520 Adherens junction
119217552
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119217552
04121 Ubiquitin system [BR:
ppug04121
]
119217552
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119217552
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
119217552
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119217552
Autophagy
Mitophagy
Other mitophagy associated proteins
119217552
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
HECT type E3
119217552
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
119217552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
119217552
NCBI-ProteinID:
XP_037327182
LinkDB
All DBs
Position
9:2072314..2109408
Genome browser
AA seq
776 aa
AA seq
DB search
MSSQGVRRNGPVKLRLTVLCAKNLAKKDFFRLPDPFAKVVVDGSGQCHSTDTVRNTLDPK
WNQHYDLYIGKADSITISVWNHKKIHKKQGAGFLGCVRLLSNAINRLKDTGYQRLDMNKL
GPNDNDTVRGQIVVSLQSRDRIGTGGPVVDCSRLFDNDLPDGWEERRTASGRIQYLNHIT
RTTQWERPTRPASEYSSPSGRPLSCVVDENTPVMTPVNGAEASCPPGEQRIQERRVRSQR
HRNYMSRTHLHTPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNVNCEELG
PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPRLSANLHRVLNPSPNGSRVAMDSQNTNLS
SHPPQPKDQSGPCVPQPALSPAQLPEEAECLTVPKYKRDLVQKLKILRQELSQQQPQAGH
CRIEVCREEIFEESYRQVMKMRPKDLWKRLMIKFRGEEGLDYGGVAREWLYLLSHEMLNP
YYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIMGMAVFHGHYIDGGFTLPFYKQL
LGKPITLDDMESVDPDLHNSLVWILDNDITGVLDHTFCVEHNAYGEIIQHELKPNGKSVP
VSEDTKKEYVRLYVNWRFLHGIEAQFLALQKGFNEVIPQHLLKSFDEKELELIVCGLGKI
DIADWKSNTRLKHCTPDTNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGA
AGPRLFTIHQIDANANNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEETCGFAVE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtcaaggagttaggagaaatggtccggtgaagctgcggttgacagtcctgtgt
gcaaagaacttggcaaaaaaagacttcttccggttgccagatccttttgccaaagtggtg
gtggatggctcgggacagtgtcactctacagatactgtaagaaataccctggacccaaag
tggaatcaacactatgatctatacatcggaaaggcagactcaataaccatcagtgtatgg
aaccacaagaagatccacaaaaagcagggtgcagggttcctcggctgtgtccgtctcctg
tccaacgccatcaacaggctcaaagataccggctatcagagattggacatgaataagctg
ggcccaaatgacaatgatactgtgagaggtcaaatagttgtaagtcttcagtccagagac
cgcatcgggacaggagggccagtggtggactgcagccgtttgttcgacaatgacttgccc
gacggctgggaagagaggaggacagcttctggaaggatccagtacctgaaccacatcact
cgcaccacccagtgggagagacctaccaggcccgcgtcggaatactccagcccatcaggg
cggccgctgagctgcgtggtggacgagaacacgccggtgatgacgcccgttaacggggcc
gaagccagctgccccccgggcgaacagcggatccaggagagacgggttcgatcgcagcgc
catcgcaactacatgagtcgaacgcacctgcacaccccaccggacctgcccgagggttat
gagcaaagaacaactcaacagggtcaagtctactttctccacacacagactggagtcagc
acctggcatgaccctcgggtgccaagggacctgagcaacgtgaactgtgaggagctgggt
ccgctgcctccaggctgggagatcagaaacacagcgacgggtcgcgtctactttgtcgac
cacaacaatcgaacgacacagttcacggacccgcgactatctgctaacctgcaccgtgtg
ctcaacccaagtccaaatggttcccgtgtggccatggacagccaaaacactaacctaagc
agtcacccgcctcagccgaaggaccagagtggtccctgcgtgccacagccagcactgtcc
ccggcccagctgcctgaagaggccgagtgcctgactgtgcccaagtacaagagagacctg
gtgcagaagctgaagatcctgaggcaggaactctctcagcagcaaccccaggccggccat
tgccgcatcgaggtctgccgggaagagatatttgaggagtcgtaccggcaggtgatgaaa
atgcgtccaaaggatctctggaaaagactgatgatcaaattcagaggagaagagggactg
gactatggcggcgttgcaagggaatggttatacctgctgtcccacgagatgctgaatccc
tactacggcctcttccagtactccagagatgacatctacactctacagattaaccctgac
tctgctgtcaacccggagcacctctcgtacttccactttgtgggtcgcatcatgggcatg
gcggtgtttcacggccactacatcgatggaggcttcactctgcccttctacaaacagttg
ttgggtaaaccgatcacgctggacgatatggagtccgtcgacccggacctccacaacagc
cttgtctggatcctggacaatgacatcactggcgtcctggaccacactttctgtgtagag
cacaatgcctacggagaaatcatccaacatgagctcaagcccaatggcaagagcgtgcca
gtgtcagaggacaccaagaaggagtacgttaggttgtatgtgaactggcgtttcctgcat
ggcatcgaggctcagtttctggctctgcagaaaggcttcaatgaggtcattcctcaacac
ctgctcaagtcctttgatgaaaaagaactggagctgatagtgtgtggcctgggaaagatt
gacatcgctgactggaagtccaacacccgtctgaagcactgcacccccgacaccaacatc
gtcaagtggttttggaaagccgtggagtcgtttgacgaggagaggagggccaggctgctg
cagtttgttactggctcctccagagtgccgctgcaaggcttcaaggctctacagggcgct
gcagggcccagactcttcaccattcatcagatcgacgctaacgccaacaacctgcccaaa
gcccatacctgctttaaccgaatcgacattccgccctacgagagctacgacaagctgtac
gacaagctgctgaccgcgatcgaggagacgtgtggcttcgcagtggaataa
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