Pungitius pungitius (ninespine stickleback): 119217605
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Entry
119217605 CDS
T07626
Name
(RefSeq) serum response factor-like isoform X1
KO
K04378
serum response factor
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119217605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119217605
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
119217605
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
119217605
NCBI-ProteinID:
XP_037327277
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MGTKTGKEVHSPPVNTISGTERDKENANDVLYSCSDIDSDTGEDEDTAGCGGDRRGVKRE
RSEREVGHQSGGVSPAVPGAKPGKKTRGRVKIKMEFIDNKLRRYTTFSKRKTGIMKKAYE
LSTLTGTQVLLLVASETGHVYTFATRKLQPMITSETGKALIQTCLNSPDSPPRSDPSSDA
SSDQRMSATGFEETDLTYQVTEADGGSDVAKDVIKPAFMASTTQPTSSSSTVSMQVQSGV
PSWQPPSCTNGTLLKTSAGVIVPGGFTLMSGASIPPGTHSIPLSQLQGPGSASTLAQQPQ
PTTLLRLPTTVSLSGGGVSQQLQTIQIQHSSKQTSTNQNSSDIHNPAFSTAASLHAPGMS
SSSSSSSVAGHMMYPGSHTVMYATPTSSLSEGSLAVLNAFPPTSHAQSHDPGSLPQVFFT
SLPPVTAQIPVSTVQLHPMLISQQSSSPLTELQVVSLDVHQSKDD
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggggactaaaaccggaaaagaggtccacagtcccccggtaaacaccatctctgggacc
gagagagacaaggaaaacgctaatgacgtgttgtacagttgctccgacattgactccgac
accggggaggacgaggacacggcaggctgtggcggggacaggagaggcgtgaaacgggag
aggagcgagcgggaagtcggtcatcagtccggaggggtcagccccgcggtaccgggagct
aaacccggtaagaaaaccagaggaagagttaagatcaaaatggagttcatagacaacaag
ctgagaaggtacacaaccttcagcaagaggaagaccggcatcatgaagaaggcctacgag
ttgtccacgctgaccgggactcaggtgttgctgctggtggccagtgagacgggtcacgtg
tacacctttgccaccaggaagctgcagccgatgatcacctccgagacggggaaggctctg
atccagacgtgcctcaactctccagactccccccctcgctccgacccgtcctccgacgcg
tcctccgaccagaggatgagcgccacaggcttcgaggagacggacctcacctaccaggtg
accgaggctgacggcggctctgatgttgctaaggatgtgatcaaaccagctttcatggcc
agcaccacacagcccacttcctcttcctccacggtgtccatgcaggtgcaaagcggcgtc
ccctcctggcagcctccctcctgcaccaacgggacgctgctgaagacttcagctggcgtc
attgtccctggaggcttcactttgatgtcaggtgcctccatacccccgggcacacactcc
atccccctcagccagctgcagggccctggctccgcctccacgctggctcagcaaccacag
ccgaccacgctgctccgcctcccaaccactgtgtcgctgtcaggaggcggggtatctcag
cagctacagaccatccagattcagcacagcagtaagcagacctccaccaatcagaacagc
tcagacatccacaaccctgccttctccactgcagccagtctccatgcccccgggatgtcc
tcctcttcgtcgtcttcatcagtggcgggtcacatgatgtaccctggcagtcacacggtg
atgtacgctacaccgacatcgtcactgagcgaaggcagcctcgctgttctcaatgctttc
cccccgacaagccacgcccagtcacatgacccaggttctcttcctcaggtctttttcacc
tccctccctcccgttactgctcagatccccgtctccaccgtccagctgcacccgatgctg
atcagtcagcagagtagcagtcccctgacagagctgcaggtcgttagtttggatgtccac
caatcaaaggacgactga
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