Pungitius pungitius (ninespine stickleback): 119217612
Help
Entry
119217612 CDS
T07626
Symbol
cnga1a
Name
(RefSeq) cyclic nucleotide gated channel subunit alpha 1a
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
119217612 (cnga1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119217612 (cnga1a)
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
119217612 (cnga1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
BUD22
Connexin
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
119217612
NCBI-ProteinID:
XP_062420526
LinkDB
All DBs
Position
9:11918033..11921997
Genome browser
AA seq
750 aa
AA seq
DB search
MNSCQSKRIKGEWTLHYFNKGKESPSEVCFSRVNRSAAMTASTPLQSLSVPPHTASQIST
DSEESSDDDLSASESNPDCLLNMNNSNNNEKEKKKKRKEKKEKKEKKEKKARKEMEKKEK
EDKEAKEKEEKEKEKEKEKENNKDEPKELFVINPAGNLYYNWLFIIALPVMYNWTMIIAR
ACFEELQHNYIVYWVILDYTSDIIYLADMFFRTRTGYLEQGLMVKDKKLLRDRYIGSFQF
RLDFISMLPTDFLYFILGLDYPEIRINKLLRIGRMMEFFTRTETKTNYPNIFRIGNLIMY
ILIIIHWNACFYFSFSKYIGFGADAWVYPALDDPDEPAFGEFGRKYSFSLYWSTLTLTTI
GETPPPALDSEFIFHVIDFLVGVLIFATIVGNIATMISNMNAAQAQFQSQIDNIKQYMRV
RKVDTELELRVIKWFDYLWNNGKAQNEREVLRYLPDKLKAEIAIQVHMDTLRKVRIFADC
EAGLLIELVLKLQPQVFSPGDYICKKGDIGREMYIIKDGQLAVVADDGVTQFVVLGSGSY
FGEISILNIKGSKAGNRRTANIRSIGYSDLFCLSKDDLMESLQEYPDAKGMLEDKGREIL
MRDNLIDLDPANIMPEAKELEENVNKLYNTMDQMHFKLKKMLGNYKITEKALRRRIADLE
HLTGEEVEEEEEEDEGEMKKDKKEVEGEKKEEEETGAGIKDDKEEEEEEKKEEEKDDEAK
DEEVKGEEEKDDEAKDEEVKGQEEKDEGKK
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgaacagttgccagtcgaagaggattaaaggagaatggacattacattattttaacaag
ggaaaagaatctccctctgaggtttgtttttccagggtgaacagatctgcagccatgacg
gcctcgaccccccttcagtccctctctgtgccgcctcacaccgcatcacagatctccacg
gacagcgaagagtccagtgacgatgatctaagtgcatctgaatccaaccctgattgcctg
ctcaacatgaataacagcaataacaatgaaaaggagaaaaagaaaaagagaaaggagaaa
aaagagaagaaagagaagaaagagaagaaagcaaggaaggagatggagaagaaggaaaag
gaagacaaggaggccaaggaaaaagaggagaaggaaaaggaaaaggagaaagaaaaggaa
aataacaaagacgagcccaaagaattatttgtcattaatcctgctgggaatttgtattac
aactggttgttcatcatcgccctaccagtcatgtacaactggacaatgatcatagccagg
gcttgcttcgaggagctgcagcacaactacattgtttactgggtcattctcgactacacc
tcagacataatctacctggctgatatgtttttcaggaccagaacaggttaccttgagcaa
ggcctgatggtgaaagataagaaactgctacgagatcgctacatcggaagcttccagttt
cgtcttgatttcatctcgatgcttcccaccgacttcctctatttcatcctcggcctcgac
tatccggagatccgcatcaacaagctgttgaggatcggccgcatgatggagttcttcacg
aggaccgaaaccaaaactaactaccccaacatcttccgcatcggaaacttgatcatgtac
atcctcattatcatccactggaacgcttgcttctacttctctttctccaaatacatcggt
tttggcgctgacgcctgggtgtacccggctctggatgatcctgacgagcctgcgtttggg
gagtttggcaggaagtattctttcagcctctactggtccacgctgacactaactaccatc
ggggaaacaccgccgccagccctggactcagaatttatcttccacgtaattgacttttta
gtgggcgtcttgatctttgccaccattgtgggaaacatcgccaccatgatctccaatatg
aacgctgctcaagctcagtttcagtcccaaattgacaacatcaagcagtacatgcgggtc
cgaaaggttgacacggaacttgagttgcgggtcatcaagtggttcgactacctgtggaat
aacggcaaagcacagaatgaaagagaggtcctgcggtaccttccggacaagctaaaggct
gagatcgccatccaagtccacatggacacgctgagaaaagttcgtatctttgcagactgc
gaggcaggcctgctgatcgagctggtgctcaagctgcagccgcaggtgttcagtcccgga
gactacatctgcaaaaagggcgacatcggccgcgagatgtacatcatcaaagatggacaa
cttgcagtcgttgccgacgacggcgtcacgcagtttgttgtgttggggagcggcagctat
ttcggtgagatcagcattcttaacattaaaggcagcaaagcaggcaaccggcgaaccgca
aacattcggagcatcggatactccgacctcttctgcctgtccaaggatgacctgatggaa
tcactgcaagagtatccggacgccaaaggcatgctagaggacaaagggcgggagatcctg
atgagagacaatctgatagatctggacccggccaacatcatgcccgaggctaaggagctg
gaggagaacgtcaacaaactgtacaacacgatggaccagatgcatttcaagctgaagaaa
atgctgggaaattacaagatcactgaaaaggctctgagacggcgcattgcagatctggag
catctgacgggagaggaggtggaagaggaggaggaggaggatgaaggtgagatgaagaag
gacaagaaagaggtggaaggggagaaaaaggaagaagaggaaacaggtgcgggtataaag
gatgacaaagaagaagaggaagaggaaaaaaaggaagaggaaaaagatgatgaggcaaaa
gacgaagaagtaaagggtgaagaggaaaaagatgatgaggcaaaagatgaagaagtaaag
ggacaagaggaaaaagatgaggggaaaaaataa
DBGET
integrated database retrieval system
