Pungitius pungitius (ninespine stickleback): 119217639
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Entry
119217639 CDS
T07626
Symbol
zgc:136908
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04137
Mitophagy - animal
ppug04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119217639 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
119217639 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119217639 (zgc:136908)
03009 Ribosome biogenesis [BR:
ppug03009
]
119217639 (zgc:136908)
04131 Membrane trafficking [BR:
ppug04131
]
119217639 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119217639 (zgc:136908)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119217639 (zgc:136908)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
119217639 (zgc:136908)
Membrane trafficking [BR:
ppug04131
]
SNARE
SNARE associated proteins
Others
119217639 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
119217639 (zgc:136908)
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
119217639 (zgc:136908)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
Vps4_C
RNA_helicase
AAA_14
NPHP3_N
AAA_28
Parvo_NS1
ATPase_2
nSTAND3
Mg_chelatase
AAA_7
DUF815
ATPase
AAA_18
IstB_IS21
ABC_tran
AAA_17
NACHT
AAA_24
TsaE
ResIII
Sigma54_activat
Viral_helicase1
NB-ARC
PhoH
SLFN-g3_helicase
Cytidylate_kin
KAP_NTPase
Zot
AAA_6
Motif
Other DBs
NCBI-GeneID:
119217639
NCBI-ProteinID:
XP_037327321
LinkDB
All DBs
Position
9:411089..421385
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGGADSKGEDFSTAILKHKHRPNRLIVDEALSEDSSTVSLSQNKAEQLQLFRGDAVV
LRGKKRRQTACIVLNDDTCGNERIRMNRVTRSNLRVRLGDVISIHACPDITYGTKIHVLP
LDDTIEGLTGNLFDVFLKPYFQEAYRPIHKGDIFLVRGSMRAVEFKVVETDPGEFCIVAP
DTVIYCEGEPIKREDEEESLNEIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSIGRLEILQIHTKNIKMTGDIDLERIAAETHGHVGADVAALCSEA
ALQAIRKKMTLIDLEDECIDADLLDSMAVTMDDFQWALSQSNPSALRETIAEVPQVNWAD
VGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDGSGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRSAILN
ANLRRSPVAQDVNLDYLSGITEGFSGADLTEICQRACKLAIREAIEAELRTERQRENKPD
IPMDDDFDPVPEIRKDHFEEAMQYARRSVSDNDIRKYEMFSQTLQQSRGFGDFRFPSATG
TRSGDQGSGSGSERPNLSREEGNEDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctcaggaggagcagactcaaagggagaagatttctccactgccatcctgaag
cacaaacacagacctaacagactcatcgtggacgaagctctcagtgaagacagcagcact
gtcagcctgtcacagaataaagcggagcaactgcagctcttccggggggacgcggtggtg
ttgagagggaaaaagcgccgtcagacggcgtgcattgtcctgaatgacgacacttgcggg
aatgaaagaatacgcatgaaccgcgtgacgcgcagcaacctgcgtgtccgactcggcgat
gtcatcagcatccatgcctgccctgacatcacgtacgggacaaagatccatgtcctccct
ctagatgacaccatcgagggcctgacgggaaacctctttgatgttttcctcaaaccctat
tttcaggaggcttaccggcccatacataaaggtgacatcttcctcgtgagggggagcatg
cgggcggtggagttcaaggtggtggagactgaccccggggaattctgcatcgttgccccg
gacactgtcatctactgcgagggggagccaatcaaaagagaggatgaagaggagagccta
aacgaaataggctacgacgacatcggaggctgtcggaagcagcttgcccaaatcaaagag
atggtggagcttcctctgagacaccccggcctttttaaggcgataggagttaagcccccc
agaggtatcctgctgtacggccctgcaggcacaggcaagaccctggtggcccgggctgta
gccaatgaaactggtgccttcttcttcctcatcaatggtcctgagatcatgagtaagctg
gcaggagagtcagagagcaacctaagaaaagcttttgaggaggcggagaaaaacgctccc
gccatcatctttattgacgagttggacgccatcgctcccaagagagagaagacccatggt
gaagtggagagacgtatagtctcccagctcctgaccctgatggatggcctaaagcaaaga
gctcatgtggtcgtcatggcagctacaaaccgaccgaatagtgtagaccctgccctgcga
cgctttggcaggtttgaccgcgagattgacatcggaatccctgattcgattggtagactg
gagattctgcagattcacaccaaaaacattaaaatgactggcgacatcgacctggagagg
attgctgcagagacccacggccacgtgggcgccgacgtggctgctttgtgctcagaagct
gctctgcaagcaatccgcaagaagatgaccctcatagacctggaggacgaatgcatcgac
gctgacctgctggactcgatggctgtcaccatggacgacttccagtgggctctgagtcag
agcaacccttcagctctgagagaaaccatcgcagaggtgcctcaggtgaactgggccgat
gtcggaggactggacgaggtcaagagagagctgcaggagcttgttcagtacccagttgag
tatccggacaagttcctgaagtttggtatgactccatctcgtggggtattgttctacggc
cctccgggctgcgggaaaacgctgctggctaaagctatcgccaacgagtgccaggcaaac
tttatttctatcaaaggaccggagatgctcaccatgtggtttggagaatctgaggcaaat
gtccgagacgtgtttgataaggccagacaggcagccccctgcatcttgttttttgacgag
ttagactccattgccaaatccagaggaggcggaggtggggatgggagtggtgcagctgac
agagtcattaaccagatactcacggagatggacggcatgtcggacaaaaaaaacgttttc
attattggtgccacaaacagaccggacatcatcgactcagccatcctgcggccgggccgc
ttggaccagctcatctacatcccactcccagacaaaccatctcgctccgcaatcctaaac
gccaacttgcgcaggtcccccgttgcacaagatgtgaacctggactacctgtctggcatc
acagagggtttctccggagccgacctgacagagatctgccagcgggcctgtaagctggcc
atccgggaggccatcgaggctgagctcaggaccgagcgtcagagagagaacaaaccagac
atccccatggacgacgactttgatccagtcccggagatcaggaaggaccactttgaagag
gcgatgcaatatgctcgtcgctctgtcagtgacaatgacatccgcaaatatgaaatgttt
tctcaaactctgcagcagagccgaggatttggagacttcaggttcccctctgctactggt
acccggtcaggagatcaggggtcaggctctggttcagagaggccaaatctgtcgagagag
gaaggaaatgaggatctctatcagtga
DBGET
integrated database retrieval system
