Pungitius pungitius (ninespine stickleback): 119217640
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Entry
119217640 CDS
T07626
Symbol
samd1b
Name
(RefSeq) sterile alpha motif domain-containing protein 1
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119217640 (samd1b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
119217640 (samd1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
Motif
Other DBs
NCBI-GeneID:
119217640
NCBI-ProteinID:
XP_037327322
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All DBs
Position
9:403385..411081
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AA seq
664 aa
AA seq
DB search
MSEPNKYREWILATIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFTAAGGSAEAAARERPKRDPLNNNNNNNNNNHGDSA
HSFTDQGEDSEPSPDPRAPQASASAADQKRKPASSPSSGNRSLVCGATTGCGAGSGCKEA
SAPGDTGLGPRGAGDCPPPGPRLGTNQHGGGDASGAAAGDAEASPGEMEPCVSGDDTRDT
TCSGSVRNVPQQQQQQQQRGHKPTESLEPKLPVGVGGGEKGGGGTGAAGSHANSELGDRL
VASVRSLSGKSIRGGGSAATATGGHMKPLGLKEILGYLSSQERLSEEKLTRGKVKVVMER
EVARGRLRRTRCGNITLPLRGAEAAAEPKSASADGPARSALRGAHAGTKPLPPSLREDEP
METGSEEQEREEEEEEEHEEEVSPSSDEEAGGRSPVAMTTEPELIEKTTDVEIQTSSKRE
SPQHGSKGRCGLDSLTRTRRLPVQGALLSQCDREKLEDTASNQLHIEAQMQHDRIHLTDF
DSFESKTEVGVSSCLLTPTASPRDSGVSEERGVDGGGGFVKSEGASGGPVDWTVSDVVSY
FTAAGFPEQASAFRAQEIDGKSLLLMQRNDVLTGLSIRLGPALKIYERHVKVLQKTHFED
EDCE
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaacccaataagtaccgagagtggatcctggcaacaatcgactccctccgctcg
aggaaagcccgtccggatctggagaggatttgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagaactggaaaaactgattcaagagcagacggtgctcaaa
gttagctacaaggggtccatatcgtaccggaatgccgcgaaggtgcaaaggaaaagcaga
aagaagagtgagtttacggcggcgggcggcagcgcggaggcggcggcgagggagcgaccc
aaacgcgaccccctcaacaacaacaacaacaacaacaacaacaaccacggcgacagcgcg
cacagcttcaccgaccagggggaggactcggagcccagcccggacccccgcgcccctcaa
gcatcagccagcgccgccgaccagaagcgcaagcccgcctccagcccgagtagcggaaac
cggagcctcgtttgtggcgcaacaacgggctgcggtgccgggagcggctgtaaagaagca
agtgcgccgggagacacgggattaggaccgcggggagcgggggactgcccgccgcccggt
ccgcgcctcgggacgaaccaacacggcggcggtgatgcgagcggcgcggcggcgggcgac
gccgaggcgtctcccggggaaatggagccgtgtgtgtcgggggatgacacgcgggacaca
acttgctccgggagcgtccgcaacgtcccgcaacaacaacagcagcagcaacaacgggga
cacaagccgactgagtccctcgagcccaaacttccagtcggagtcgggggaggggaaaag
ggaggggggggcaccggagcagcggggagccacgccaactccgagctgggcgacagattg
gtggcttctgttcgcagcctgtccgggaaaagcatccgcggggggggctccgcggccacc
gccaccggaggccacatgaagccgctcggcctgaaggagattttgggctatttgagcagc
caggagcggttgtcggaagaaaagctgacccgaggcaaagtcaaagtggtcatggagaga
gaggtggccaggggccgactgcgcaggacgcgctgcgggaacattactcttcctctgagg
ggggcggaggcggcggcggagccgaagagtgcgtccgctgacggaccggcgaggagcgcg
ctgcggggcgcgcacgcggggacaaagccgctgcccccctctctccgggaggatgagccg
atggagacaggcagcgaagaacaggaacgagaggaggaggaggaggaggaacatgaggag
gaggtttccccgagttctgatgaggaggcgggaggacgatccccggtagccatgacaacc
gaacctgagctcattgagaaaaccacagatgttgagatccagacatcatcaaagagggag
agccctcagcacgggtcaaaagggaggtgtgggcttgattccctcaccaggacgaggcgt
ttacctgttcagggtgctttgctgtcacaatgtgacagagaaaagttggaggacacagcc
tccaatcagctgcatattgaggcccaaatgcaacatgacagaatccacctcacggacttt
gacagctttgagtccaaaacggaagtcggcgtgtcgtcctgcctgctcacacccactgcg
tctccgagagactccggcgtgtccgaggagcgaggggtggacggaggaggagggtttgta
aagtctgaaggagccagtgggggcccagtggactggacagtgtctgatgtagtcagttat
ttcacagcagccggtttccctgaacaggcctctgccttcagggcccaggaaatcgatggc
aagtctcttctcctcatgcagcgtaacgatgttttgactggcctgtcaatcagactcggg
cccgccctcaagatctatgagcgccatgtaaaggttctgcagaaaacacactttgaggat
gaagactgtgaatga
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