Pungitius pungitius (ninespine stickleback): 119217685
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Entry
119217685 CDS
T07626
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119217685 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119217685 (trim25)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119217685 (trim25)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119217685 (trim25)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRY
SPRY
zf-RING_UBOX
zf-RING_2
TRIM_CC
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-B_box
zf-RING_5
RING_XB3-XBAT31
ANCHR-like_BBOX
HAP1_N
CEP152_CC2
U-box
Motif
Other DBs
NCBI-GeneID:
119217685
NCBI-ProteinID:
XP_037327423
LinkDB
All DBs
Position
9:13556270..13563869
Genome browser
AA seq
728 aa
AA seq
DB search
MAEMDVGPFSLISLEDELTCSICLSPFDCPVTIPCGHNFCQECLLATWKDSYSCPQCRTH
FPTKPDLKKNTVLSTVVETFNLRTAKSAAGPPAEEGEKEEKEARAAVGKEAIRCDTCMQA
DATHTCLTCMASFCEEHLRPHRENPTFRLHQLSQPIGDLSERICPDHHKLMELFCSQHSR
PICSLCLQQVHKGCSFTSPEEQRNKTESDLRNKMDLLDGKIAKNENVILQIEVMQNKLKD
SATNRKATLAAEYRHIRDMLSRDEHDALNSVDRELEGGQTKLKDLAKKFTENVDSMSKAK
EDIHSLLSQSHTQSFLQASFDLPKAATFEPFTPRINIDSKKVTATQAFTALLKEHLTEIL
KQPVEARQHFLKPVTDKKAVPGSAPESFGSTGSQPESEVNMPPKQKRPPRSHSPGRPPIQ
PLFHPVRMPSYMEPHRGWNPHQHPPGPYMDPQFMAGQRTNDNSGILEPQWMGPGPQTKPA
AKKKTQKQKPPQPTEHNLGKGKKTLSMEDLLDNEKDKSKGRTPEAKSDETPETCDVPPSI
TSAMKRSDLLKYSSVLTLDPKTAHKRIALSDGLTKACVSDEPANYPDCPERFSVCSQVLA
SKGFSRGRHYWEVKLSSNNFIGVGLAYSSIDRKGPTSRLGRNAHSWCVEWFNVKLSAWHN
SSETVLVCGNPKRVGVLLDCEEGTATFYSVADRAYPFHSFVFPFAEAVYPAFWIFSSGTF
ATLCNLQA
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggccgagatggacgtgggtccgttctcgctgatcagcctggaggacgagctgacctgc
agcatctgcctgagtcccttcgactgtccggtgaccatcccctgcggacacaacttctgc
caggaatgcctgctcgccacctggaaggactcctacagctgccctcagtgtcgcacccac
ttccccaccaagccggacctgaagaagaacacggtcctcagcaccgtggtggagaccttc
aacctgaggaccgccaagagcgcggccggtccgccggcggaggagggggagaaggaggag
aaggaggcgcgcgcggccgtggggaaggaggccatacgctgcgatacgtgcatgcaagcg
gacgcgacgcacacctgcctcacctgcatggcgtctttctgcgaggagcacctgcggcct
caccgggagaacccgacgtttaggcttcaccagctgagtcagcccatcggagacctgtcg
gagcggatctgcccggaccaccacaagctgatggagctcttctgcagccaacacagccgc
cccatctgcagcctctgcctgcagcaggtgcacaaaggctgctccttcacgtcccccgag
gagcagaggaacaagacagagtccgacctgaggaacaagatggatttgctggacgggaag
attgcgaagaatgaaaatgtcatacttcaaatagaggtcatgcagaacaagctaaaggac
tccgccaccaacaggaaggcgactttggcagccgagtatcggcatatacgggacatgttg
tcccgagatgagcatgacgctctgaattcggtggaccgcgagctggagggtggtcagacc
aaactcaaggatctcgcaaagaagttcaccgagaacgttgacagcatgagcaaagccaaa
gaagacatccacagtctgctgagtcagtcccacactcagtccttcctacaggcctcattt
gacctgcctaaagctgcgacttttgaacctttcacgccacgaatcaacatagactccaag
aaagtgacagcaacacaggcctttactgctctcctgaaggagcacctgacagagatcctc
aaacagcctgttgaggccagacagcacttccttaaaccagtcacagacaaaaaagcagtt
cctggttcagcaccggagagttttggaagtactggatctcagccagaatctgaagtaaac
atgcctccgaagcagaaaagaccgccgaggtcccacagtccaggccgtccacccatccag
ccattattccatccagttcgtatgccttcttacatggagccacatagaggctggaatcca
catcagcatccaccaggcccttatatggatcctcagttcatggcaggacagaggacaaat
gataacagtggcattcttgagccacaatggatgggtccaggtccccaaaccaaaccagcc
gcaaagaagaaaactcaaaaacaaaaacctccccagcccacagaacacaatctggggaaa
gggaaaaaaaccctttcaatggaggacctgctggacaatgagaaagacaaatccaaaggc
cgtactcctgaagctaaatccgatgagacgccagaaacgtgtgacgttcccccgagcata
acatcagccatgaagaggagcgatctcctgaaatatagctcagtgctgacgttggatccg
aagacggcccacaaacgcatcgcgctgagcgacggcctcaccaaggcctgcgtgtcggac
gagcccgccaactaccccgactgccccgagcgcttctccgtctgctcccaagtgctggcc
tccaagggcttctccagaggacgccactactgggaagtcaaactgagcagcaacaacttc
atcggcgtcggcctggcctacagcagcatcgaccgcaaaggccccaccagccgcctgggc
cgcaacgcgcactcctggtgcgtcgagtggttcaacgtcaagctgtccgcgtggcacaac
agcagcgagaccgtgctggtctgtggcaacccaaagcgcgtcggcgtgctgttggactgc
gaggagggcactgctacgttttacagcgtggccgacagggcgtaccctttccactccttt
gtcttccccttcgcggaagctgtgtacccggctttctggatcttctcgagtggcacgttc
gccactttgtgcaatctgcaggcatga
DBGET
integrated database retrieval system
