Pungitius pungitius (ninespine stickleback): 119217776
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Entry
119217776 CDS
T07626
Symbol
lef1
Name
(RefSeq) lymphoid enhancer-binding factor 1 isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04310
Wnt signaling pathway
ppug04520
Adherens junction
ppug04916
Melanogenesis
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
119217776 (lef1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
119217776 (lef1)
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
119217776 (lef1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119217776 (lef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119217776 (lef1)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
119217776 (lef1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119217776
NCBI-ProteinID:
XP_037327571
LinkDB
All DBs
Position
9:complement(15019582..15057841)
Genome browser
AA seq
374 aa
AA seq
DB search
MPQLSGGGGDPELCATDEMIPFKDEGDPHKEQIFAELSHSEEEGDLADIKSSLVNESESS
PNSNSHDGARLSQIPQDSYHEKDRDHLEEGKLQDLYSKGHPYQGYPGYIMMSNMNDSYMN
NGSLSPPMPRTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHPQDVNNKQGMQRHHQGP
DMTNFYSLSPGGVGQLTPPLGWFSHHMVPGPQGPHATGIPHPAIVNPQVKHEPLHETDIM
HMKPQHEQRKEQEPKRPHIKKPLNAFMLYMKEMRANVVAECTLKESAAINQILGRRWHAL
SREEQAKYYELARKERQLHMQLYPGWSARDNYGKKKKRKREKMQESAPGGKRDHFSTCKA
KAAATGLLLEMEAC
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccacagttatcaggcggcggtggagacccggagctgtgcgccacggacgaaatgatc
ccgttcaaagacgagggagacccgcacaaggagcagatcttcgccgagctcagccactcg
gaggaggagggagacctggcggacatcaagtcctctctggtcaacgagtcggagagcagc
cccaacagcaacagccacgacggagctagactgtcccaaataccgcaagattcatatcat
gaaaaagacagagaccatttggaggagggaaaactccaagatctgtacagtaaagggcat
ccgtaccagggctacccgggctacatcatgatgagcaacatgaacgactcctacatgaac
aatggctccctctcgccgcccatgcccagaacgtccaacaaagtccccgtggtgcagccg
tcccacgcagtccacccactcaccccactgatcacgtacagtgacgagcacttcgcccca
ggtcctcatccccaggatgtcaacaacaaacaaggaatgcaaaggcatcaccagggacca
gacatgaccaacttctactccctgtctcccggaggagtcgggcagctcacgcccccgctg
ggatggttctcgcaccacatggtgcccggcccccaaggtccccacgccacagggatcccg
cacccggccatcgtcaacccacaggtcaaacacgagcctctgcatgaaacagacatcatg
cacatgaaacctcagcacgaacagagaaaggagcaggagcccaaaagaccgcacatcaag
aagccgctaaacgccttcatgctctacatgaaagaaatgcgtgccaacgtggtcgccgag
tgcacgctgaaggagagcgctgccatcaatcagatcctgggacgaaggtggcatgcttta
tctcgggaagagcaagctaagtattatgagctagcccgcaaggaacggcagctccacatg
cagctctacccaggctggtccgctcgagataactatggaaagaagaagaagcggaagagg
gagaagatgcaggaatcagccccaggaggaaaacgggaccatttctccacgtgcaaagcg
aaggccgcagctacgggccttctgcttgagatggaggcctgctag
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