Pungitius pungitius (ninespine stickleback): 119217810
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Entry
119217810 CDS
T07626
Symbol
zcchc7
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
119217810 (zcchc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119217810 (zcchc7)
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119217810 (zcchc7)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
119217810 (zcchc7)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
119217810 (zcchc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
zf-CCHC_2
UPF0561
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
119217810
NCBI-ProteinID:
XP_037327649
LinkDB
All DBs
Position
9:5209519..5247776
Genome browser
AA seq
628 aa
AA seq
DB search
MFGAYQYRKELEDDLYGEDEGDSDGSEPNSELEFHLYSQLHYSSNAGALGEQEDGVETEG
QDSQQHKSPENTVDVDGEQDCRPPSPDLNNLLEYLRKKKKTQDKLNKQKTGNAKGPKSFS
SFIEEVIVIDSSPDVISISENGDDDDDDDEGVCALKGQRLRRLQTSTPAQQGRHKRSLSL
PVTVDSSTSVSSSDASQSDSSDSSDSDDLENWMILGQGRQDGDQSISLNLEGGSDGNHDA
GENESDWLVSAKDKEAQIYNRGVRVTTLRVAKRYYTDKNVQCRNCNKNGHLSTNCPQPKK
LPPCFLCGNPGHGPSGCPNKHCNNCGLPGHLYNSCSERAHWNKRCERCGMKGHLFDACPE
IWRQYHITTKVGTPTSLRHDKRGGRQPAYCYNCSMKGHFGHACGSQKMYNWTYHSSTFIS
HYDTKKDIKRREQSVLSKAKELKKNGFITNSLQIHFSPGPPNKKRKVDPYNHQSPNSHKP
NHIFFKESNVFTAPKTKKNNKHKTLESNAKPWKPKRPVPASKASVPPAKVIVDEAKDFPR
GGGKGGALKEKKKKMMARSTQRAHIKGNPDRLSWTVTAEMQGAGSKPQKKKKGNKNQKQK
KAEKKAAAEEMYPKDENLFLIKQRKRRK
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcgtaccagtatcggaaggagttggaggacgatctctatggggaagatgaa
ggggactctgatgggtctgagcccaacagcgagctggagttccacctctacagccagctc
cactactcttcaaacgccggggcgctgggggagcaggaggacggggtggagacggagggc
caggatagccagcagcataagtcacctgagaacactgtagacgtggacggagaacaggat
tgtaggcccccgtcacccgatttgaataatttactggagtacctgcgaaaaaagaagaaa
acgcaagacaaactcaataaacagaagactgggaacgccaaaggtccaaagtcattttca
tcatttatcgaagaggtcatcgtgatcgactccagccccgacgtcatctccatctcagag
aatggcgatgatgatgatgacgacgatgaaggggtctgcgccttgaaggggcaacgctta
cgccggctgcagacttccaccccggcccaacagggccgccacaaaaggagcctcagtttg
ccggtgaccgtggactccagcacctcagtgtccagctcagacgcttcgcagtcggactct
tcggactcgtccgattcagatgacctggagaactggatgatcctgggtcaaggacggcag
gacggggaccagagcatctcgctcaacctggagggagggtccgacggcaaccacgatgct
ggagaaaatgaaagtgactggttggtttctgccaaggacaaagaggcccagatctacaac
agaggcgtcagggtgacgacgctgcgggtggcgaagcgatactacaccgacaagaacgtc
cagtgtagaaactgcaacaagaacggacatctctccaccaactgccctcagcccaaaaag
ttgccgccctgcttcctttgtggcaatccaggccacgggcccagtggatgtcccaacaag
cactgcaacaactgcggcctgccaggacacctctacaattcgtgcagtgaaagagcgcac
tggaacaaacggtgcgagcgctgcggcatgaaggggcacctcttcgacgcctgtccagag
atctggaggcagtatcacatcacgaccaaggtgggtactcctacgagcctgcggcacgac
aagcggggagggaggcagccggcctactgctacaactgctccatgaaaggacactttgga
cacgcgtgtggaagccagaagatgtacaactggacgtatcacagcagcactttcatcagc
cactacgacacgaagaaggacatcaagcgccgagagcagtcagtgttgtcgaaggccaaa
gaactaaagaaaaacggctttatcacaaacagccttcagatccatttcagtccgggaccg
ccaaataagaaacgcaaagttgacccttacaaccaccagagccccaacagccacaaaccc
aaccacatcttttttaaggaaagcaacgtcttcacagcgcccaaaaccaagaagaacaat
aagcacaagaccctagagagcaacgcgaaaccgtggaaacccaagagaccggttcccgcc
tccaaagccagcgtcccgccggccaaagtcatcgtggatgaagcaaaggactttccccga
ggtggagggaagggaggagctttgaaggagaagaagaagaagatgatggcgaggagcacg
cagcgagctcacataaagggtaacccggaccgcctcagttggaccgtcactgccgagatg
cagggggcggggtccaagccgcagaagaagaagaagggaaacaagaatcaaaagcagaag
aaggccgagaaaaaggcggccgcggaggagatgtacccgaaggatgagaacctgttcctc
atcaaacagaggaaacgcagaaaatag
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