Pungitius pungitius (ninespine stickleback): 119217869
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Entry
119217869 CDS
T07626
Symbol
nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119217869 (nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119217869 (nup133)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119217869 (nup133)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119217869 (nup133)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
119217869 (nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
Nucleoporin_N
TetR_C_18
Motif
Other DBs
NCBI-GeneID:
119217869
NCBI-ProteinID:
XP_062420357
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All DBs
Position
9:complement(20034496..20046314)
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AA seq
1139 aa
AA seq
DB search
MFSPRSTPSSGRRPQGRNTGRKSVSGAAAGLLFSPRRTPLSARSTPSRLQTHSAADSINY
DVQPFGSSLPVKVMEALTMADVDDQISVKVNESGWAWMVCGERLIIWKISQTAVAKLSVC
KELQLPGSEYSYTADLVAVASAAPLESAPVQSISVLAVSAEGTARLWSSLAQEGNYTETD
VDLGDLCNFVVAVNGGSFVLSSVKCRLLRASADSSGRLQWRALQQGQGVLSGIGRRVSSL
FGMLSPPANDTLHSLLWVGGASCLYTLTSSSLSKWEVDDSWEHQILTWDAQRALSESIAD
AIWGSESNYEELKEGANVTYLDMKLSEAGLVLLAAAWHPSDTPCLAYFCLVTLQDNGAAI
SEQFTVEVTKYNPPFQSEEALQATRLLLPRCPGSTGSTAFLYNEEMVFASSTCAVRGGLP
DEKISFSSPGDGVRGGGCCADLPVFFSQNSGLVAVVARQSASILPETMEDSLFASLAATP
EVSVMETPTRAEPVAQEDKTKLLKAAFLQFCRNDLVGAQTVTDELFPPDGDGEEGAELDD
VVTRIDLDLVDDYPASDPRWAESVPDESAGFPLTSLIILHQLEDKMKAHVCFMDFLLQAG
LLDRLGRVTVRSSPMATRLLLCEHAEKLQAAMALKSHHTKRGELVNRAIGLALQRNNGAV
PPSLTAADVFFREVSQISSVLDCLLDEEERSLKENPVDSVQWAEGVLTVNAILKDMLQAA
TQYRETKAFMYRESSAVEPEYVPWTASGAVGGVRAIIARQHDIVLRSVYPHADSELRAAL
CEQLAALLDVYLGGYVAQLTSLQQQRPLGAQQERYNSLEMEYSQRRSELLAPLLELGQYQ
WVAALAEKYCDFDILVQMCEQTDNQSRLQHYLTKFADQNFADFLFRWYMEKGKRGKLLSQ
PAAQHQQLASFLQSHQHLSWLHHIHVHDYCSANRTLYSQANAETRYFVKKKTLLALSKLT
VLASDLPEEQLHQQVDEILEQERFLLHQETLPRQLLEDKQQNPDTMPLLSAHNLIQLYIC
DDNRRANEYDFKKALDLLEYIDEEEAGDTDSLKCEIFGKALRRDDWFSDDGTDDPLEAAK
DSIFVKILLKLIQEGVSLQTYLPDVKELLELDDLSGLKSKPYFEFVLRANYEHYLEVQM
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtttagcccccgctccaccccgagctccggccgccggccgcagggcaggaacaccggg
aggaagagcgtctccggagcggccgccggtctgctgttctccccgcgcaggacgccgctg
tccgccaggtcaacaccctccagactgcagacacattcggctgcagattccatcaactac
gacgtgcaacccttcggctcgtcgctgcccgtcaaagtgatggaggccctgacgatggcg
gacgtcgacgaccagatctccgtgaaggtgaatgagagcggctgggcctggatggtgtgc
ggagagagactgatcatctggaagatctcccagaccgccgtggccaagctgtctgtgtgt
aaggagctgcagctgcccggcagcgagtacagctacaccgccgacctcgtggccgtggcc
tccgccgcccccctggagtcggcccccgttcagtccatctccgtcctggcggtgtcggcg
gagggaaccgctcgcttgtggagcagcttggcccaggagggcaactacacggagacggac
gtggacctgggggacctctgcaacttcgtcgtcgctgtcaatggtggaagcttcgtactg
tcctccgtgaagtgtcgtctgttgagagcgagcgccgactcctcggggaggctgcagtgg
cgggcgctgcagcagggtcagggcgtgctctccggcatcgggcgccgcgtctccagcctg
ttcgggatgctctcgccgccagccaacgacacgctccacagcctgctgtgggtgggcgga
gccagctgcctctacacgctgaccagctccagtctgagcaagtgggaggtggacgacagc
tgggagcatcagatcctcacctgggacgcccagcgcgcgctgagcgagagcatcgccgac
gccatctgggggtcagagagcaactacgaggagctgaaggagggagcgaatgtgacgtac
ctggacatgaagctcagcgaagccggcctggtgcttttggctgccgcctggcacccctca
gacaccccctgcctggcttacttctgcctggtcaccctgcaggacaacggagccgccatc
tccgagcagttcaccgtggaagtcaccaagtacaaccctccattccagagcgaggaggcc
ctgcaggccacgcggctgctgctgccgcgctgccccggctccaccggctccaccgccttc
ctgtacaacgaggagatggtgttcgcttcctccacctgcgccgtcagaggaggactacca
gacgagaagatcagcttcagctcccccggtgacggtgtccgtggtggaggctgctgcgcc
gacctgcccgtcttcttctcccagaacagcgggctggtggcggtggtggcgcggcagagc
gcctccatcctgccggagacgatggaggactcgctgttcgcttcgctggccgcgacgccg
gaggtttccgtgatggagacgcccaccagagcggagccggtggctcaggaggacaaaacc
aaactcctgaaggcggctttcctgcagttctgccgtaacgacctggtgggggctcagacg
gtcacagacgagctcttcccccccgacggcgacggggaggagggggccgagctggacgac
gtggtgaccagaatcgacctggacctggtggacgactatccggcctccgacccccgctgg
gccgagtccgtccccgacgagagcgccggctttcctctcacctccctcatcatcctccac
cagctggaggacaagatgaaggcccacgtctgcttcatggacttcctgctgcaggcgggt
ctgctggaccgcctcggccgcgtgacggtgcgctcgtctcccatggcgacgcgcctgctg
ctgtgcgaacacgccgagaagctgcaggcggcgatggcgctgaagagccaccacaccaag
cgcggcgagctggtgaaccgggccatcggcctggcgctgcagaggaacaacggcgccgtc
ccgcccagcctcacggccgccgacgtcttcttcagggaggtgtctcagatctcctcggtg
ttggattgtctgctggacgaggaggagcggagtctgaaggagaacccggtggactcggtg
cagtgggccgagggggttctcaccgtcaacgccatcctgaaggacatgctgcaggctgct
actcagtacagggagacgaaggccttcatgtacagagagagctccgctgtggagccggag
tacgtcccgtggaccgcgtcgggcgccgtcggcggcgtccgcgccatcatcgcccgccag
cacgacatcgtgctgcgctcggtgtacccgcacgccgactcggagctgcgcgccgccctc
tgcgagcagctggcggcgctgctggacgtctacctcggcggctacgtggcccagctgacc
tcgctgcagcagcagaggcccctgggggcccagcaggagcgctacaacagcctggagatg
gagtacagccagcggcgctccgagctgctggcccccctgttggaactgggtcagtaccag
tgggtggcggcgctggctgagaagtactgtgacttcgacatcctggtccagatgtgcgag
cagaccgacaaccagagccgcctgcagcactacttgaccaagttcgcagaccagaacttt
gctgacttcctgttccgctggtacatggagaaggggaagagggggaagctgctctcccag
ccggccgctcagcaccagcagctggccagcttcctgcagtcgcaccagcacctgagctgg
ctgcaccacatccacgtgcacgactactgcagcgccaaccgcacgctgtacagccaggcc
aacgccgagacgcgttacttcgtgaagaagaagacgctgctggccctcagcaagctgacg
gtgctcgcatccgacctgccggaggagcagctccaccagcaggtcgacgaaatcttggag
caggagcgcttcctgctgcatcaggagactcttccccggcagcttctggaggacaagcag
cagaaccccgacacgatgccgctgctcagcgctcacaacctcatacagctgtacatctgc
gacgacaacaggcgagccaacgagtacgacttcaaaaaggctctggacctgctggagtac
atcgacgaggaggaagccggggacaccgactcgctgaagtgcgagatcttcggcaaagcg
ctccgaagagacgactggttctcggatgacgggaccgacgaccccctggaagccgccaag
gacagcatctttgtgaagatcctcctcaaactcatccaggaaggagtctctctgcagacg
tacctgcctgacgttaaagagctgctggagctggacgacctcagcggtttgaaatcaaaa
ccttattttgaatttgtcctccgagcgaattatgaacattacctggaagtccagatgtga
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