Pungitius pungitius (ninespine stickleback): 119217873
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Entry
119217873 CDS
T07626
Symbol
xpo1a
Name
(RefSeq) exportin-1
KO
K14290
exportin-1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03008
Ribosome biogenesis in eukaryotes
ppug03013
Nucleocytoplasmic transport
ppug03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119217873 (xpo1a)
03008 Ribosome biogenesis in eukaryotes
119217873 (xpo1a)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119217873 (xpo1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119217873 (xpo1a)
03009 Ribosome biogenesis [BR:
ppug03009
]
119217873 (xpo1a)
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119217873 (xpo1a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119217873 (xpo1a)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
119217873 (xpo1a)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
119217873 (xpo1a)
Pre-60S particles
119217873 (xpo1a)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119217873 (xpo1a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
119217873 (xpo1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CRM1_C
Xpo1
CRM1_repeat_2
CRM1_repeat_3
CRM1_repeat
IBN_N
TPR_TNPO3_IPO13_2nd
OS-C_C
BspA_v
Motif
Other DBs
NCBI-GeneID:
119217873
NCBI-ProteinID:
XP_037327778
LinkDB
All DBs
Position
9:20121873..20131606
Genome browser
AA seq
1066 aa
AA seq
DB search
MPAEMTMLADHPARQLLDFSQKLDINLLDNVVNSMYHDIGSQQRVAQEVLTNLKDHPDAW
TRVDTILEFSQNMKTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDPANM
EKEGVYISKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEEVFD
FSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIPLGY
IFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVNQYEEQFVNLFTLTMCQLKQMLPL
NTNIRQAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHFMLLVSEV
EETEIFKICLEYWNHLAAELYRESPFSTSSTPLLSDVPPRRHLYLPVLSQVRLLMVSRMA
KPEEVLVVENDQGEVVREFMKDTDAINLYKNMRETLVYLTHLDYADTERIMTEKLHNQVN
GTEWSWRNLNMLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNKAIIASNIM
YIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKISQKCRRHFIQVQVG
EVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVHERLIEKYMLLPNQVW
DSIIHQATKNVDILKDAETVRQLGSILKTNVRACKAVGHPFVVQLGRIYLDMLNVYKCLS
ENISSAVQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSNDPQMVGENFVPPLLEAVL
IDYQRNVPAAREPEVLSTMATIVNKLGVHITGEIPKIFDAVFECTLNMINKDFEEFPEHR
THFFYLLQAATSQCFPAFLSIAPAQFKLILDSIIWAFKHTMRNVADTGLQILYTLLQNVS
GEDAAAQSFYQTYFCDVLQHIFSVVTDTSHTAGLTMHATILAYMFNLVEEGKVSVALSAA
SPANNQAHVQEYIANLLKTAFPHLQDAQVKVFVTGLFSLNQDIPAFKEHLRDFLVQIKEF
AGEDTTDLFLEERETSLRQAQEEKHKLQMSVPGILNPHELPEEMCD
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagaaatgacgatgttggccgaccacccagccagacagctgctggacttcagt
cagaaactggacatcaacctgttggacaatgtcgtcaactccatgtaccacgacatcgga
tcccagcaacgagtggcccaggaagtcctcaccaacctgaaggaccacccggacgcctgg
acgagggtggacaccatcctggagttctctcagaacatgaaaaccaaatactatgcgctg
cagatcctggagacggtcatcaaaacgcgctggaagattctgcccagaaatcagtgtgaa
ggcataaagaagtacgttgttgggttgatcatcaagacttcatctgaccctgccaacatg
gagaaagagggggtgtacatttcaaaactcaacatgatcctcgtacagatcctgaagcag
gagtggcccaagcactggcccaccttcatcagcgacatcgtgggcgccagtcggaccagc
gagagcctctgtcagaacaacatgatcatcctcaagctgctcagcgaggaggtgtttgac
ttctccagtggccagatgacgcaggtgaaggccaagcacctcaaggacagcatgtgcaac
gagttctcccaaatattccagctgtgccagtttgtgatggagaactcccagaatgcccct
ctggtccatgccacgctggagactctcctgcgcttcctgaattggattcctctaggttac
atctttgagactaagctcatcagcacgttggtctacaagttcctcaacgtgcccatgttt
cgcaacgtgacgctgaaatgtctgacggagatcgccggcgtgagcgtcaaccagtacgag
gagcagtttgtcaacctgttcaccctcaccatgtgccagctcaagcagatgctgccgctg
aacaccaacatccgccaggcgtactccaacgggaaagacgacgagcagaacttcatccag
aacctcagcctgttcctctgcaccttcctcaaagagcacggacagctcatcgagaagagg
cccaacctgcgcgagacgctcatggaggccctgcacttcatgctgctggtgtcggaggtg
gaggagacggagatctttaagatctgtctggagtactggaaccacctggcggcggagctc
tacagggagagtcccttctccacctccagcacgccgctgctgtccgacgtcccgccgcgg
cgacacctctacctgcccgtgctgtcccaggtgcgcctgctgatggtgagccgcatggcc
aaaccggaagaggtgctggtggtggagaacgaccagggcgaggtggtccgggagttcatg
aaggacacggacgccatcaacctctacaagaacatgagggagaccctcgtttatctcacc
catctggactacgccgacacggagcgcatcatgacggagaagctccacaaccaggtgaac
ggcacagagtggtcgtggaggaacctgaacatgctctgctgggccatcggctccatcagc
ggggcgatgcacgaggaggacgagaagaggttcctggtgaccgtcatcaaggacctgctg
ggcttgtgtgagcagaagagggggaaggacaacaaggccatcatagcgtccaacatcatg
tacatcgtgggccagtatcctcgcttcctccgagctcactggaagttcctcaagaccgtc
gtcaacaagctgtttgagttcatgcacgagacccacgacggggtgcaggacatggcgtgc
gacaccttcatcaagatctcccagaagtgtcggcgtcacttcatccaggttcaggtgggc
gaggtgatgcccttcatcgacgagatcctcaacaacatcaacaccatcatctgcgacctg
cagccgcagcaggtgcacaccttctacgaggccgtcggctacatgatcggagcccagacg
gaccaggctgtccacgagcgcctgatagagaagtacatgctgctgcccaaccaggtgtgg
gacagcatcatccatcaggccaccaagaacgtggacatcctgaaggacgcggagacggtg
cgacagctgggcagcatcctgaagaccaacgtgagggcctgcaaggccgtggggcatccc
ttcgtggtgcagctggggcgcatctacctggacatgctcaacgtctacaagtgtctgagc
gagaacatttcctccgcggtgcagacaaacggtgagatggtgaccaagcagcctctgatc
aggagcatgaggacggtgaagagagagacgttgaagctgatctccggctgggtcagccgc
tccaacgaccctcagatggtgggggagaactttgtgccccccctgctggaggcggtgctc
atcgactaccagaggaacgttccggcggcccgggagcccgaggtcctcagcaccatggcg
accatcgtcaacaagctgggcgtgcacatcacgggagagatccccaagatcttcgacgcc
gtcttcgagtgcactctgaacatgatcaacaaggactttgaagaattcccagaacaccga
acccacttcttctacctcctgcaagccgccacgtcgcagtgcttcccggccttcctctcc
atcgccccggctcagttcaaactcatcctggactccatcatctgggccttcaagcacacc
atgaggaacgtggccgacacaggtctccagatcctctacacgctgctgcagaacgtgtcc
ggggaggacgcggcggcgcagagcttctaccagacgtacttctgtgacgtgctgcagcac
atcttctccgtggtcacggacacgtctcacactgcagggctcaccatgcacgccaccatc
ttggcctacatgttcaacctggtggaggaagggaaggtcagcgtcgcgctgagcgccgcc
agcccggccaacaaccaggcgcacgtccaggagtacatcgccaacctgctgaagacggcc
ttcccccacctgcaagatgcccaggtgaaggtgttcgtcacggggctgttcagcctgaat
caggacatccccgccttcaaggagcacctgagggacttcctcgtgcagatcaaggagttt
gccggcgaggacacgacggacctgttcctggaggagagggagacgtcgctgcgtcaggcc
caggaggagaagcacaagctgcagatgtcggtgcccggcatcctgaacccccacgagctg
ccggaggagatgtgcgactga
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