Pungitius pungitius (ninespine stickleback): 119218098
Help
Entry
119218098 CDS
T07626
Symbol
pcdh7a
Name
(RefSeq) protocadherin-7
KO
K16498
protocadherin delta 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119218098 (pcdh7a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119218098 (pcdh7a)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119218098 (pcdh7a)
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119218098 (pcdh7a)
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Protocadherins
119218098 (pcdh7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
RET_CLD1
Motif
Other DBs
NCBI-GeneID:
119218098
NCBI-ProteinID:
XP_037328127
LinkDB
All DBs
Position
9:4818430..4854277
Genome browser
AA seq
1377 aa
AA seq
DB search
MQRLGAVHSSAAQALSLVALALQMLTQLPGADSALRYRVAEEGPPDVKIGNVAVDLGLTA
GTGSGDVTFALESGSEFFKIDNVTGELTTGPRRIDREKLPQCQMIFDENECFLDFEVSVI
GPLQSWVDLFEGRVVITDINDNTPSFPSPVLQLSVEENRPIGTLYLLPTATDRDFGRNGI
DRYELIQDGATGSGSTRRVAPGNPIARVEGLVDRRGRSGDSGGGPRSTVFELQVADIPDG
EKQPQLIVKGTLDREQKDSYELVLRVRDGGNPPRSSQALLRVSITDVNDNSPQFERSTYE
AEMAENAPPGTPVLQVRASDRDIGVNGQVEYVFGAATESVRRLLRLDEATGWLSVLHRID
REDVAQLRFTVSARDRGQPPRTDRTTVILAVRDENDNVPVVEIRKIGRIPVRDGAALVPE
NVLVDTPVALVQVSDRDQGENGAVTCTVVGDVPFTLKPAGETALPPLPADEAFDRNKKKY
FLHTSALLDYEATKEYSVTIVAVDSGSPSLSSNSSLMVRVVDINDHAPAFPQSVVEVHFA
ENNSPGERVVTVVASDADSGKNAEIAYSLDPAGNGPFYIDADNGDIRATGVLDRELRERY
ELRVIAKDKGTPPLQGSTTVVVQVTDRNDNAPKFVQEIFTFYVKENLLANRPVGMVTVTD
ADEGENAELSLFVEMDGVDAKKAGEKVDGEDGEKKKEEVFSIENNTGTIFSSASFDREKL
STYTFRVRAVDGGEPRKTSTATVSLFVTDENDNAPSVTSPANESYTLLPPASSARTIVRT
VTAVDSDTGPNADLRYALVGGNPFQLFEIGHTNGVITLAETLERRHRGLHRLVIRVNDSG
APSLCAIALVHVFINESLVNATLVDAQVARSLMAPLSLDIAGDPDSERALGKQRLSVAIG
VLAGAAAVILVILLVVTARQCGAQGKNGYEAGKKEPEEDFFSPPGAQPQASRGRGSDHGR
KPRRDKRNGGGTSAVAGGGKADRSLYSGIVTVNGLRRHGNDDDEEDLSSASERLAARYCA
MDGDPGSPRMGGGKRHQSSPDLARHYKSSSPLPAVNLQPHSPPAEGKKHQAVQDLPPSNT
FVGSGGCVGSAGSSSSSSGGSGNADAMSLGSDQCSEYGCQTGNKYSKQGTLRRVTFSVVS
QPQDAGCYDSGLEDSETPSSKSSAGPPRLGALPLPEEGYERTTPEGSVGEEEHVENDARQ
LPDVALTGKCTRECDEFGHSDTCWMPVRPSPRQRHGSDPPPRLSTFAPGDDNNNLRGNDH
ESDSESAGSAGSSEPGVVGGEEGQRLPLANGDPLGSLGDGDRNRNMGDHNRNLLNRKMTS
ASYDTFSSAGFGRRQQEEEGGGGGEGRNPAEVIPLTRTGGDYKTTSCLTLSRREVYL
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcttggcgcagtgcactcctccgcggcgcaggctctcagcctcgtggcccta
gcgctgcagatgctgactcagctgcccggcgcagactcagccctccggtaccgggtggcg
gaggagggtccccccgacgtaaagatcggcaacgtggccgttgaccttggcctcactgct
ggcacgggcagcggggacgtcacctttgccctggagagtggctccgagttctttaagatt
gacaacgtgacaggtgagctgacaacaggcccgcggcgcatcgaccgggagaaacttccg
cagtgccagatgatatttgacgagaacgagtgcttcttggacttcgaggtgtcagtgatt
ggcccgctgcagagctgggtggacctgttcgagggccgcgtggtcataactgacatcaat
gacaacacaccttccttcccctcacctgtgctccagctctcagtggaggagaatcgcccc
ataggaaccctttacctgctacccaccgcaacagacagagattttggacggaatggcatc
gaccgctacgagctgattcaagatggtgcgaccgggtcaggttccacaagacgagtggcc
ccagggaatcccatcgctagagtggagggacttgtggaccggaggggtagaagtggtgat
agcggaggaggacccagaagcacagtgttcgaactgcaagttgcagatataccagatgga
gagaaacaaccgcagctcattgtaaaaggcacattggatcgcgagcaaaaagactcctac
gagctggttctcagggttcgagatggagggaacccgccgcgttcctcccaagccctgctt
cgcgtttccatcacagacgtgaacgacaatagcccgcagtttgagaggtccacatacgag
gcagaaatggcagaaaatgcccctccaggtacgcccgtcctccaggtcagagcttcagac
cgcgacattggagtcaacgggcaggtggagtacgtcttcggagctgccactgaatctgta
cggcgactcctgcgcctggacgaggccaccgggtggctgagcgtcctccacaggattgac
agggaagacgtggcgcaactgaggttcacagtgtcggccagagaccgtggtcagccgccc
cgcaccgaccgcaccaccgtgattttggccgtgcgggacgagaacgacaacgtgcccgtc
gtggagatccgaaagatcggacggatcccagttcgagatggagccgcgttggtgccagag
aacgtcctggtggacacccctgtggctttggttcaggtgtcagaccgagaccagggagag
aatggggccgtgacgtgcacagttgtaggggacgtcccattcaccctgaagccagctggg
gaaacggcactcccgcccctacctgcagacgaagcctttgacaggaataagaaaaaatac
ttcctacatacttctgccttgctagactacgaggccaccaaagagtacagtgtcaccatt
gtggcggtagattctggcagccccagcctatccagcaacagctcacttatggtgcgagtt
gtggatatcaatgaccatgccccggcttttccccagagcgtcgtggaggtccactttgct
gagaacaactcacctggtgaaagggtagtcactgttgtagcctcagacgcagacagtgga
aagaatgcagagattgcgtactcccttgaccctgcagggaatgggccattctacatagat
gcagataatggagatatccgtgccacgggggttttggaccgtgagctaagagagaggtat
gaactccgtgtgattgccaaggacaaaggcacacctcccctgcaaggctccaccactgtt
gtcgttcaggtgaccgaccgcaacgacaatgcgccaaagtttgttcaggaaatcttcaca
ttctacgtcaaagagaacctgctcgccaacaggccggtcggcatggtcaccgtgaccgat
gccgacgaaggggagaacgccgaactcagtttgtttgtcgagatggacggggtcgatgcg
aagaaggccggtgagaaagtggatggcgaagatggcgagaaaaagaaagaagaggtgttt
tccattgaaaacaacacaggaactatcttctcttcggcgtcgtttgaccgggaaaagctt
tcaacgtacaccttccgcgtccgagctgtggacggaggggagcctcgtaaaacctccact
gccacggtttcgctcttcgtgacggacgagaacgacaacgccccctctgtcacatccccg
gccaatgagtcctacaccctgcttccgcctgccagcagtgcccgcaccatcgtcaggacc
gtgacagccgtagactcagacaccggccccaatgcggaccttcgctatgccctagtgggg
gggaatcccttccagctgtttgagatcggccacaccaatggggtgatcactctggctgaa
accctggagcggcgccacagaggcctgcatcgcctggtgatccgggtcaatgacagcggg
gcaccttccctctgtgccatcgccctggtacatgtcttcatcaacgagagcttggtcaac
gccacacttgtggatgctcaggtggcccgaagtctcatggctccgctgtccctggacatt
gcaggagacccggacagcgagcgtgcgctagggaaacagcgcctcagcgtcgccatcggc
gtcctggcgggggccgcggcggtcatcctggtcatcctgctcgtagtcaccgcccggcaa
tgcggcgctcagggcaagaatggctacgaggccggtaagaaggagccggaggaggacttc
ttcagtcccccaggggctcagccgcaggccagccgcggcagggggtcagaccacgggcgc
aaaccccggcgggacaagcgcaacggaggcggcaccagcgcggttgccggaggaggcaag
gcggaccggtccctctacagcggaattgtgacggtcaacggactgcgtcggcacggcaac
gacgacgacgaggaggatctgagcagcgccagcgagcgcctggccgcccgctactgcgcc
atggacggagaccccggcagcccgaggatgggcggcggcaagaggcaccaatccagcccg
gatctggccaggcactacaaatccagctcccccctccccgcggtcaacctgcagccccac
tcccctccggccgagggcaagaagcaccaagcggtccaggacctgccgccttccaacacc
tttgtgggcagcggcgggtgcgtggggagcgccggctccagcagcagcagcagcgggggc
agcggcaacgccgacgccatgtccctgggatccgaccagtgctcggagtatggctgccag
actgggaacaagtacagcaaacaggggaccctccgccgggtgaccttctccgtggtcagc
cagccccaggacgccggctgctacgacagcggcctggaggactcggagacgccgagcagc
aagagctcggcggggccgccgcggctcggggcgctgccgctgccggaggagggctacgaa
cggaccaccccggagggcagcgtgggggaggaggagcacgtggagaacgatgccagacag
ctgcccgatgtagccctgacaggaaagtgcaccagggagtgcgacgaattcggccactcc
gacacctgttggatgcccgtgcgcccctccccccgccagcgccacggcagcgaccccccg
ccgcggctctccaccttcgcccccggcgacgacaacaacaacctccgcggcaacgaccac
gagagcgacagcgagagcgccggcagcgcggggagctcggagcccggggtggtcggcggc
gaggagggtcaaaggttacccctggccaacggggaccccctcggcagcctgggggacgga
gaccgcaacaggaacatgggcgaccacaaccgcaacctcctgaaccgcaagatgacctcg
gcgtcctacgacacgttcagcagcgcgggcttcgggaggcgccagcaggaggaggagggt
gggggggggggagaaggccggaacccggccgaggtcatcccgctgacgcgcaccggggga
gactacaagaccacgtcctgcctgacgctgtcccgccgagaggtctacctgtga
DBGET
integrated database retrieval system
