Pungitius pungitius (ninespine stickleback): 119218145
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Entry
119218145 CDS
T07626
Name
(RefSeq) procollagen galactosyltransferase 1-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00310
Lysine degradation
ppug00514
Other types of O-glycan biosynthesis
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119218145
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
119218145
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ppug01003
]
119218145
Enzymes [BR:
ppug01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
119218145
Glycosyltransferases [BR:
ppug01003
]
O-Glycan biosynthesis
O-linked Gal type
119218145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
MT-A70
Motif
Other DBs
NCBI-GeneID:
119218145
NCBI-ProteinID:
XP_037328224
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All DBs
Position
9:complement(532233..540763)
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AA seq
609 aa
AA seq
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MPRVTSLLPALLIVLLPGPGRGYFPEERWSPESPLLAPRVVLSVVCRNSAHSLPLFLGAI
ERLDYPKERIALWVATDHNIDNTTAILREWLIKVQNDYHYVEWRPQEEPRAYEDEPGPKH
WSNLRYEHVMKLRQAALETAREMWADYLLVADCDNLLTRSDTLWKLMSENKTIVAPMLES
RAAYSNFWCGMTSQGYYKRTAAYMPIRKQEQRGCFAVPMVHSTYLLDLQKEASRQLAFYP
PHPEYSWALDDVIVFAYSARMADVQMYVCNKETYGYFPVPVRSHATLQDEVESFVHTQLE
IMVKDPPLEPSSFLSPPPKQPNRMGFDEVFMINLERRSDRRERMLSSLYEQEISCKVVAA
VDGKALNKTDIEAMRIKMLPGYRDPYHSRPLTKGELGCFLSHYNIWKEIADRGLQTSLVI
EDDLRFEVFFKRRLQTLLQEVTKHKLDWDLIYIGRKRMQVDHQEKPVPDIHNIVEADYSY
WTLGYLLSLQGAQKLLRAEPLSKLLPVDEFLPVMYNKHPVSEYMDHFEVRDLRAFSAEPL
LVYPTHYTGDQGYISDTETSVVWDNETVKTDWDRAKSRKTQEQGELSFEAQNSDVLQSEL
ENWSARDEL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgccccgggtcacctctcttctgcctgccctgctaatcgtcctcctgccgggcccgggt
cgtggatatttcccggaggagcgctggagccccgagtctccgctcctcgccccccgggtc
gtcctctcggtggtgtgccgcaactcggcgcactccctgccgctgttcctcggagccatc
gagcgcctcgactacccgaaggagcgcattgcgctgtgggtggcgacagatcacaacata
gacaacacaacagccatcctgagggaatggcttatcaaggtgcagaatgactatcactat
gtggagtggagacctcaggaggaacccagggcctatgaagacgagccggggcccaagcac
tggagtaacctccgctacgaacacgtaatgaagctgcgtcaggccgctctggagactgcc
cgtgagatgtgggccgactacctgctggtggccgactgcgacaacctcctcacgcgcagc
gacacgttgtggaaactgatgagcgaaaacaagaccattgtggcgccgatgctggagtcc
agagccgcctactccaacttctggtgcggcatgacttcacagggttactacaagcgcaca
gcagcctacatgcccatccgtaagcaggagcaacgcggctgtttcgccgtgccgatggtc
cactccacctacctgctggacctacagaaagaggcctcccgtcagctggctttttatcca
ccacacccagagtacagctgggccctggatgatgtcatcgtctttgcgtactctgctcgg
atggcggatgtgcagatgtatgtgtgcaacaaagagacttatgggtatttcccggtgcca
gtgcgttcccacgccaccctgcaggatgaggtggagagcttcgtgcacactcagctcgag
atcatggtgaaagaccctccgttggagccctccagcttcctgtctcccccccccaagcag
cccaacaggatgggctttgatgaggtgttcatgataaatctggagcggaggtccgaccgt
cgcgagcgaatgttgagcagcttgtacgagcaagagatcagctgtaaagtcgtagctgct
gtggatggcaaagctctgaacaagactgatatagaggcgatgaggattaagatgctgccg
ggttacagagacccgtatcatagtcggcccctcaccaaaggggaactgggctgtttcctc
tctcattacaacatctggaaggagatagcagatcgtggtctgcagacctccctggtcatc
gaggatgacctccgcttcgaggtgttcttcaagcgacgtctccagacgctgctgcaggag
gtgacgaagcacaagctggactgggatctcatttacattgggcggaagcggatgcaggtg
gaccaccaggagaagccggtaccagacatccacaatatcgtggaggcggactactcctac
tggacactaggctacctgctgtctctacaaggagcccagaagctcctcagggcagaacct
ctcagcaagctgcttcctgtggatgagttcctccctgtcatgtacaacaaacatccagtt
tccgagtacatggaccactttgaggtccgggacctgcgtgccttttcggccgagccgctc
ctggtgtatccgacccattacaccggagaccagggctacatcagtgacacggaaacatcg
gtggtctgggacaacgagaccgtcaaaacggactgggaccgggccaagtcgaggaaaacc
caagagcagggggagctgagcttcgaggctcagaactctgacgtgctgcagtctgagctg
gagaactggagcgcacgggacgagctgtga
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