Pungitius pungitius (ninespine stickleback): 119218200
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Entry
119218200 CDS
T07626
Symbol
sorcs3a
Name
(RefSeq) VPS10 domain-containing receptor SorCS3 isoform X1
KO
K27083
VPS10 domain-containing receptor SorCS3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119218200 (sorcs3a)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Others
Others
119218200 (sorcs3a)
Endosome - Lysosome transport
119218200 (sorcs3a)
Endosome - Golgi transport
119218200 (sorcs3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
DUF7828
Motif
Other DBs
NCBI-GeneID:
119218200
NCBI-ProteinID:
XP_037328323
LinkDB
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Position
9:6494771..6691470
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AA seq
1252 aa
AA seq
DB search
MRSPTVFHSHKSLSEMKTWLGFSPGLHLSLGIWVVIAAQTLQNAKAEITCASCASPVQLH
VRELKLGRSTDPTEEPHTLKQIRIEFRDQDPEVDAQHETGESGEHVHRFPQHVSSEGVST
KKDESGSGEFRHSASDGAGDTEKIEDAALRRAKRSRPEFSETGRTDMDAEAPEDWGSLFD
GHKKARSEFGWNRGKAGGNNRQDETKLIGTTFSLTGDSAHNHAVVYWSGQNSSVILILTK
LYDFHIGSVTESTLWRSTDYGSTYERMNDKVGSKTVLSYLYVCPTNKRKIMVLTDPEFES
SVLISSDEGASYQKYRLTFYVLSLLFHPTEEDWALAYSHDQKLYSSVDFGRKWQIIHERV
TPNRFYWSVSGLDKELDLVHMEAHTPDGNVQYVTCQAPMCTEVNRNYPFPGYIDISSLVV
QDDYIFIQVPTSGRASYYVSYKRDSFIQIKLPKYSLPKDLHIVSTDEKQVFAAVQEWNQN
DTYNLYLSDTRGIYFTLAMENVKTTRGIGGNQMLDLYEVAGIKGMLIANKRQDNQVKTYM
TYNKGREWRLLQAPPTDLDGNDIHCILPFCSLHLQLQMSENPYLSGAISTKATAPGIIVA
TGNIGAELSYNNVGMFISSDAGNSWRQIFEEEHNVWFLDKGGAIVAVKQPSVPTRHLWVS
FDEGRQWTQHSFSLVPLFVDGVLVEAGADNQIMTFFGHFSHRSEWQLIKIDYKSIFSGKC
TEEDYQTWHLHNQGEPCVMGQKQIYMKRRPGNYCMLGEDYSSILSAESCICRAHDFECDY
GYERRSDGNCRPSFWFNPSTVSRSCSQGQNYLNSTGYRKVVLNNCTKGVKEMYTARKQQC
PNRPPKGLMLTIKDGKLAANLGSNVTFLVHLDEGDSLHTNIQLDFGDGTAVSYSNLSWTE
EGIKHIYKSAGIFRVTALAENTLGYDSKTLFLHVTCPVEHVRLIAPFVVIKNKEVNITAV
ALPSHSRTVTYFWWLDNNTEPLITLDGSISHTFPNDGMHTITVQVAAANSIRQDTKTIAV
RGFFKSLLLSFSPNLDEFNPDIPEWRQDVGRVIKRALLQVILSALPQVSDFPEDQLLVAV
FPGVPTAAELFLLPHNNQSEGKKKSEEGLEQVSDIIVSALNQNLVEFELKPGVRVIVYNT
QLTLAPLVDSNPRHSSSALLMLLLVVFLGLAVFLIYKFKRKIPWINIYAEVNQEKEQEMI
GSVGQGDSAPKITLSEFSTSKELTEKQLDARVKRGVGTACESTREIPNCTSV
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaggtctccaacagtctttcactctcacaaatctttgtcagagatgaagacttggctt
ggcttcagcccagggttgcacttatccctgggtatctgggtggtgatagccgcccaaacc
ctccaaaatgccaaagcggagataacttgcgcatcttgtgcgtcgccagttcaacttcat
gtgagggaattaaagctcggtcggagcactgacccaacagaggagccgcacaccctgaaa
cagatccgaatagagttcagggaccaagatcctgaagtggacgcccaacacgagacaggc
gaatctggcgagcatgtgcaccgattcccccaacatgtcagttcagaaggagttagcacc
aagaaagatgaatcggggtccggtgaatttcgtcacagcgccagtgatggggcaggggac
accgagaagattgaagatgctgcacttcggagagcgaagagaagccgtcctgagttcagt
gagaccgggcggactgacatggacgcggaagcaccggaggattggggctcactgtttgac
ggacacaagaaggccaggtccgagttcggatggaaccggggaaaagcgggaggaaataac
cggcaggatgaaaccaagctcatcggcaccactttctctctgaccggggactctgcgcac
aaccacgcggtggtttactggtccggacagaacagcagcgtgatcctgatcctaaccaag
ctgtatgactttcatattggcagcgtcactgagagcactctttggagatctactgactat
ggctccacgtatgagaggatgaacgacaaagtcggatccaagactgtcctgagttacctg
tacgtctgtccaactaacaagagaaagatcatggtgttgactgatccagagtttgagagc
agtgtgctcatcagctctgacgagggagccagttaccagaagtaccgcctcacgttctac
gtcctcagccttctttttcaccccactgaagaggattgggccttagcctacagtcatgac
caaaagttgtacagctcggtggactttggtaggaaatggcagatcatccacgaacgcgtg
acaccaaatagattctactggtctgtctccggcctcgacaaggaactagatctggtgcac
atggaggctcacactccagatggaaatgtgcagtatgttacatgccaagctcccatgtgc
actgaagttaacaggaactacccattccccggatacattgacattagctctttggtggtt
caagatgactacatattcatacaggttcctacatctggacgagcatcttattatgtgtcc
tacaaaagggactcattcatacaaattaaactgcccaaatattccctgcctaaggacttg
cacatcgtcagcaccgatgagaagcaggtattcgcagcggtgcaggagtggaaccagaat
gacacctataacctgtacttgtctgacacaagagggatctactttaccttggccatggaa
aatgtcaagaccactaggggcatcggagggaaccagatgctggatctgtacgaggtcgca
ggaattaaaggcatgctgattgctaacaagaggcaagacaaccaggtcaaaacctacatg
acctacaataaaggccgggagtggaggctcctgcaggctcctcccactgacctggatggc
aacgacattcattgcatattgcccttctgctcacttcatctccaactgcagatgtccgag
aacccttacttgtcaggagcaatctccaccaaggccactgcaccgggtatcatagtcgcc
acaggaaatattggagcagagctgtcctacaacaacgttggcatgttcatttcatctgat
gctggcaatagctggagacagatatttgaagaggagcacaacgtttggtttctggacaaa
gggggggccatcgttgctgtcaaacagccatctgtgccaaccagacacttgtgggtcagc
tttgacgaggggaggcagtggacccagcacagcttctccttggtgcctctgttcgtggat
ggagttctggtggaggccggggccgataaccaaatcatgaccttttttggacacttcagc
catcgttctgaatggcagctcatcaagatcgactacaagtccattttcagcgggaaatgc
acagaggaagactatcaaacctggcacctgcacaaccagggggagccatgtgtgatgggg
caaaaacagatttacatgaagcgcaggcctggaaactactgcatgctaggagaggactac
tccagtatcctttcagctgagtcctgtatttgtcgagctcatgactttgaatgtgattac
ggatatgagcggcgaagcgacgggaactgtcggccttccttctggttcaacccctccact
gtctccagaagctgcagccagggtcaaaactacctcaacagcacagggtaccgcaaagtg
gtgttgaacaactgcaccaaaggagttaaagaaatgtacacggcaagaaagcagcagtgc
cccaacagacctcccaaaggactcatgctgaccatcaaagacggcaaactcgctgccaac
ctgggcagcaatgtcaccttcttggttcatctggatgagggtgactctctgcacaccaac
atccaactggattttggtgatggcacagccgtctcctactccaacctgagctggaccgag
gaggggatcaaacacatttacaagtctgctggaattttccgtgtcacagctttagcggag
aacacactgggttatgattccaaaaccctcttcctgcatgtcacatgtccagtggagcat
gtccggcttatcgctcccttcgtggtcataaagaacaaggaggtgaacatcacagcagtg
gcattacccagccactcgcgtactgttacttacttctggtggctagacaacaatactgag
cctttgataacgttagatggcagtatctcacacacctttccaaacgacgggatgcacacc
atcaccgtccaagtggctgcagccaacagcatacggcaagacaccaagaccatagcagtc
agaggattcttcaaatctctacttttatctttctcccctaatctggatgagttcaacccc
gacataccagagtggagacaggatgtggggagagtaattaagagggctttgctccaagtc
attctttctgccttgccacaggtgtctgacttcccagaggatcagctcttggtagccgtg
ttcccaggcgttccaaccgctgctgagctcttcctgttaccccacaacaaccaatcagag
ggcaagaaaaagagtgaggagggacttgagcaggtatccgatataattgtgagcgcgctg
aaccaaaatctggtggagttcgagctcaagcccggtgtcagggtaattgtgtacaacaca
cagttaacactggcaccgttggtggattctaacccaagacacagcagctcggctttgctg
atgctcctcttagtggtgttcctgggcctagcagtgttccttatctacaaattcaagaga
aaaataccttggataaatatatatgctgaggtgaaccaggagaaagagcaagagatgatt
ggctcggtgggccagggcgacagcgcgcctaaaatcacactgagtgagttctccacatcc
aaagagctcacggagaaacaactggatgccagggtcaaacgaggagttggaactgcttgc
gagagcacaagggagataccaaactgtactagcgtgtaa
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