KEGG   Pungitius pungitius (ninespine stickleback): 119218279
Entry
119218279         CDS       T07626                                 
Symbol
aptx
Name
(RefSeq) aprataxin isoform X1
  KO
K10863  aprataxin [EC:3.6.1.70 3.6.1.71 3.6.1.72]
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    119218279 (aptx)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119218279 (aptx)
Enzymes [BR:ppug01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.1  In phosphorus-containing anhydrides
    3.6.1.70  guanosine-5'-diphospho-5'-[DNA] diphosphatase
     119218279 (aptx)
    3.6.1.71  adenosine-5'-diphospho-5'-[DNA] diphosphatase
     119218279 (aptx)
    3.6.1.72  DNA-3'-diphospho-5'-guanosine diphosphatase
     119218279 (aptx)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     119218279 (aptx)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Other NHEJ factors
     119218279 (aptx)
SSDB
Motif
Pfam: DcpS_C FHA_2 zf-C2HE HIT FHA zf-C2H2_6 zf-C2H2_4 GalP_UDP_tr_C
Other DBs
NCBI-GeneID: 119218279
NCBI-ProteinID: XP_037328471
LinkDB
Position
9:11848178..11850900
AA seq 328 aa
MPMCWLISEGDSHKPIRLPHQQTVVLGRGPETTIKDKKCSRHQVELKAECNKGYVKVKQL
GLNPTSVDSVVVGKDKEVKMKAGQQLLIVNQLYPYTIQFKEDAARDHGGTKRPPELSSED
RESRRQESSLKVAKQSESGHEEATKSSESFGHWSQGLKTSMQDPKMQIYKDDKVVVIKDK
YPKARYHWLVLPWQTISSLKALSKEHCDLVKHMQQVADQMVQQCPDANSLRFRMGYHAIP
SMSQVHLHVISQDFDSPCLKNKKHWNSFTTDYFMESQDVIQMLETNGRVDVKEGTSELLK
LPLRCHICRKDIPTIPALKEHLKSHFPS
NT seq 987 nt   +upstreamnt  +downstreamnt
atgccaatgtgctggcttatcagtgagggggatagtcataaacccattcgactgccacat
caacagacagttgtcttgggtcgaggtccagagacgactattaaagacaaaaaatgctct
cgtcaccaagttgaattgaaagcagagtgcaacaaaggttatgtcaaagtaaaacagttg
ggcttgaatcctacctctgtagattctgtggtggttggtaaggacaaggaggtaaagatg
aaggctggacagcagcttcttattgtcaaccagctctacccatacacaatacagtttaag
gaggatgccgccagggaccacggcggcaccaaaagaccaccagagctgtcttcagaggac
agagagagccgcagacaggaatcaagtctgaaagtagccaaacagtctgaaagcggccat
gaagaagctacaaaaagcagtgaaagctttgggcattggagccaaggtctgaagacctca
atgcaagaccctaagatgcagatatacaaggatgataaggtagtggttatcaaagataaa
taccccaaagctcgctaccactggctggtccttccgtggcagaccatttccagcctgaag
gccttaagtaaggagcactgcgacctggtgaaacacatgcagcaggtggctgaccagatg
gttcagcagtgcccagatgctaactcgctacgttttcgtatggggtaccatgccatcccc
agtatgagtcaagtacacctgcatgtgattagccaggactttgactctccttgtttaaag
aacaaaaagcactggaactcatttacgactgactatttcatggagtcgcaggatgtcatt
cagatgcttgaaacaaatggaagagtcgacgtgaaagaaggaaccagcgagttgttgaaa
ctacctctgcgctgtcacatctgtcgcaaagatattcccactataccagctcttaaggag
cacctaaagtctcactttcccagctaa

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