Pungitius pungitius (ninespine stickleback): 119218347
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Entry
119218347 CDS
T07626
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119218347 (rhbdl3)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
119218347 (rhbdl3)
Peptidases and inhibitors [BR:
ppug01002
]
Serine peptidases
Family S54: Rhomboid family
119218347 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
DUF5580_M
AIF-1
EF-hand_9
EF-hand_8
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
119218347
NCBI-ProteinID:
XP_037328611
LinkDB
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Position
9:complement(3216679..3255839)
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AA seq
407 aa
AA seq
DB search
MAGASRELPVNSSPAVASNAEGDEIEVLESTDVLPVAPEDQWKSLFDKYDPDNSGFISTE
RFRDLLATYGSELDPHKLEVLLALADGNADGKICYQDFVNLMSNKRSNSFRRAILQGGRQ
LKGCSLRDEAGLGLSQRLIRHVAYETLPREVDRKWYFDSYTYCPPPWLILAITIAEVAVF
MYYGFQLDRLVLQVSSPSFLKSPLPYHPQLRAQAWRYLSYIFMHTGIEHLSLNMAMQLLV
GVPLEMVHGALRIGLVYACGVLAGSLAVSVTDMTAPVVGSSGGVYALVSAHLANVVMNWS
GMKCQFKLFRMAMALVCMSVEFGRAVWLRFYPPAFPPCPNPSFVAHLGGVVVGLTLGVVV
LQNYEQRLQEQSLFWIFFSVYALFVLCAVFWNIFAYGLLDVRLPPTP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgagccgggagttacccgtgaactcctcgccggcggtggcgtccaacgcg
gagggcgacgagattgaggttttggaaagcaccgacgttctccccgtcgctccagaggac
caatggaagtctctgtttgacaagtatgacccagataattcgggcttcatcagtacggag
cggttcagggacctgctggcgacctacggctccgagctcgacccccacaaactagaagtc
ctactggccctcgccgacggtaacgccgacgggaagatctgctaccaagactttgtcaac
ctgatgagcaacaagcgctccaacagtttccggagggccatcctgcaggggggccggcag
ctgaagggctgcagtctcagagacgaggcgggtttgggcctgtcccagcggctgatccga
cacgtcgcctacgagacgctgccccgcgaggttgaccgcaagtggtactttgacagctac
acctactgtcccccaccttggctcatcctggccattaccattgctgaggtggccgtgttc
atgtactacggcttccagctggaccgcttggtcctgcaggtgtccagcccgtctttcctg
aagagccccttgccttaccacccgcagctacgcgcccaggcctggagatacctgagctac
atcttcatgcacactgggattgaacacctgagcctgaacatggccatgcagctgctggtg
ggagtccctctagaaatggtccacggagccctgcggattggactggtctatgcgtgtggt
gtgctggcagggtctctggcagtgtctgtcaccgacatgacggctccagtggtcggctca
tccgggggggtgtatgctctggtctcggcacatttggccaatgtggtcatgaactggtcg
ggaatgaagtgccagtttaagttattccggatggccatggccctggtttgcatgagcgtg
gagttcggccgggcggtgtggctgcgcttctatccgccggcgtttcccccgtgccccaac
cccagcttcgtagctcacctgggaggggtggtggtgggcctgacgctgggtgtggtggtc
ctgcagaactacgagcagcggctccaggagcagtccctgttttggatcttcttctcggtc
tacgccttgttcgtgctctgcgctgtcttctggaacatcttcgcctacgggctgctcgac
gtgcgactgcccccgacgccctga
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