Pungitius pungitius (ninespine stickleback): 119218468
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Entry
119218468 CDS
T07626
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119218468 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
119218468 (eif4a3)
03015 mRNA surveillance pathway
119218468 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119218468 (eif4a3)
03041 Spliceosome [BR:
ppug03041
]
119218468 (eif4a3)
03009 Ribosome biogenesis [BR:
ppug03009
]
119218468 (eif4a3)
03012 Translation factors [BR:
ppug03012
]
119218468 (eif4a3)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119218468 (eif4a3)
mRNA cycle factors
Stress granule specific factors
119218468 (eif4a3)
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119218468 (eif4a3)
Ribosome biogenesis [BR:
ppug03009
]
Eukaryotic type
90S particles
Helicases
119218468 (eif4a3)
Translation factors [BR:
ppug03012
]
Eukaryotic type
Initiation factors
eIF-4
119218468 (eif4a3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
119218468
NCBI-ProteinID:
XP_037328826
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MAAAGLQGRKRILRDEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVCLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgccggattacagggcaggaagaggatcctgcgggacgaagacatgaccaag
gtggaattcgaaaccagcgaggaggtggacgtcacccccaccttcgacacaatgggcctt
cgggaggacttgctccgcggcatctatgcttacggttttgagaagccatcagcgatccag
cagagagccatcaagcagatcatcaaaggccgggacgtcattgcccagtctcagtctgga
acagggaagacggcgaccttctgtgtgtcggtgctgcagtgtctggacatccaggttcgg
gagactcaggctctgattctggctccaacaagggagcttgctggacagatccaaaaggtg
ctgttggctttgggagactacatgaacgtccagtgtcacgcctgcatcggggggaccaac
gtaggcgaggacatcaggaagctggactatggccagcacgtggtgtcgggaacacctgga
cgagtgtttgatatgattcgtcgcaggagtctgaggaccagggccatcaagatgctagtt
ctggacgaagctgatgagatgctcaataaaggcttcaaggagcagatctacgacgtgtac
cgctaccttcctccagccacacaggtgtgtctgatcagcgccacgctgcctcacgagatc
ctggagatgaccaacaagttcatgaccgaccccatccgtatcctggttaaacgtgatgag
ctcacgctggaggggatcaaacagttctttgttgccgtggagagagaagagtggaagttc
gacactctgtgtgatctgtacgacacgctgaccatcacgcaggctgtcatcttctgcaac
accaagaggaaggtggactggctgacagagaagatgagggaggccaacttcacggtgtcg
tcgatgcacggagacatgccccaaaaagagagggagtccatcatgaaggagttcagatcc
ggagccagtcgtgttttgatctctacggacgtttgggctcgaggtttagatgttcctcag
gtttctctgatcatcaactacgacctgcccaacaaccgagagctctacatccacaggatt
ggtcggtctggtcgttatgggcgtaagggcgtggccatcaactttgtgaaaaacgacgac
atccggatcctgcgtgacatcgagcagtactactccacccagatcgacgagatgcccatg
aacgtggctgacttgatctaa
DBGET
integrated database retrieval system
