Pungitius pungitius (ninespine stickleback): 119218564
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Entry
119218564 CDS
T07626
Symbol
pdgfba
Name
(RefSeq) platelet-derived growth factor beta polypeptide a
KO
K17386
platelet-derived growth factor subunit B
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04010
MAPK signaling pathway
ppug04020
Calcium signaling pathway
ppug04510
Focal adhesion
ppug04518
Integrin signaling
ppug04540
Gap junction
ppug04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
119218564 (pdgfba)
04020 Calcium signaling pathway
119218564 (pdgfba)
09133 Signaling molecules and interaction
04518 Integrin signaling
119218564 (pdgfba)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119218564 (pdgfba)
04540 Gap junction
119218564 (pdgfba)
09142 Cell motility
04810 Regulation of actin cytoskeleton
119218564 (pdgfba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
ppug04052
]
119218564 (pdgfba)
00536 Glycosaminoglycan binding proteins [BR:
ppug00536
]
119218564 (pdgfba)
Cytokines and neuropeptides [BR:
ppug04052
]
Cytokines
Growth factors (RTK binding)
119218564 (pdgfba)
Glycosaminoglycan binding proteins [BR:
ppug00536
]
Heparan sulfate / Heparin
Growth factors/receptors
119218564 (pdgfba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDGF
PDGF_N
Motif
Other DBs
NCBI-GeneID:
119218564
NCBI-ProteinID:
XP_037328989
LinkDB
All DBs
Position
9:21291938..21301036
Genome browser
AA seq
481 aa
AA seq
DB search
MRSAVLLLAALFAARLRLGGAEGDPLPSSLVHLVRNSPISSVDDLELLLQETNGIEEEED
EHDAPANHTHHRRLPRSLVEAQQAQQAACKVRTEVMKVERSSANFLLWPPCVEVQRCSGC
CNTWVLQCVPTLSSTRYLQVTKIRYVNRKVHYEKAIISVEDHVSCRCQAASSVPIQTHPR
PLPPTPLQPAQPLPRTVHANPPPKTHGSKADLHRHDDLKHNQQAYGPEERDPAVGRWQQG
GYTQLVHWTHLGPSEARAEHSVMGGGAPQVGHGSGYAGSREEGGVHAAPLQRQQQLLQHQ
QLHRGGAEDQELGGRRWLDAPQSDAGTPPASPTRPPKLELSPAPPTALVTSRRQAEVTGR
TGGGEREESGSANSRDSGEAEPANQGPEKDSEQSRGVGHLTEEERRHKVLEMIQTEPDHR
THLRPHHPKPRPKPTSFKSGLSASTPGPPPARRAPFRPASPRRRRKHSKRISKAAMRAMI
M
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccgcggtcctgctgctggccgcgctctttgcggcccggctacggctcggcggc
gctgagggagatccgctgccctcgtcgctggtccacctggtgaggaactcccccatctcc
tctgtggacgacctggagctgctgctgcaggagaccaatggaatagaggaggaagaagac
gagcacgacgcgcccgccaaccacacccaccacagacgattacccagaagcctcgtggag
gcgcagcaggcgcagcaggcggcgtgtaaagtgcggacggaggtgatgaaggtggagcgg
tccagcgccaacttcctgctgtggcctccttgcgtggaggtgcagcgctgctcaggctgc
tgcaacacttgggtgctgcagtgcgtccccaccctctcctccacccgatacctgcaggtg
acaaagatccgctacgtcaacaggaaagtccactatgagaaagcgatcatctccgtggag
gaccacgtcagctgcaggtgccaagctgcctcctccgtccccatccagacccacccacgc
cccctcccacctacgccgctgcagcctgcgcagcccctcccccggaccgtccacgccaac
cccccgcccaagactcacggctccaaggctgacctccatcgccacgacgacctgaagcac
aaccagcaggcctacgggcccgaggagcgggacccggcggttgggcggtggcagcagggc
ggctacacccagctggtgcactggacgcatctcgggccctccgaggccagggcggagcac
agcgtcatgggaggcggggccccccaggtcgggcacgggagcgggtacgccgggagccgg
gaggagggcggcgtgcacgccgcgccgctgcagaggcagcaacagctgctgcagcatcag
cagctccaccgcggcggggccgaggatcaagagctgggggggcggcgctggctggacgcg
ccgcagtccgacgccggtacgccgcctgccagcccgactcggccgcccaagctagaacta
agccccgcccctcccacggcgttggtgaccagcaggagacaggccgaagtgaccgggcgc
acgggaggcggcgagagggaggagagcggctcggccaatagcagggactcaggcgaggcc
gagccggccaatcagggcccggaaaaagactcagaacagagccgcggggtcggccattta
acggaggaggagaggaggcataaagttctggagatgattcagacggagccggatcaccgg
actcatcttcgtccacatcatccgaagccgagaccgaagccgaccagcttcaaatcaggc
ctctccgcctcaacccccgggccccccccggcccgccgggccccgttccgcccggcgtca
cctcggcgccgcaggaagcacagcaagcgcatcagcaaggccgccatgagggccatgatc
atgtag
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