Pungitius pungitius (ninespine stickleback): 119218579
Help
Entry
119218579 CDS
T07626
Name
(RefSeq) THO complex subunit 4-like
KO
K12881
THO complex subunit 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119218579
09122 Translation
03013 Nucleocytoplasmic transport
119218579
03015 mRNA surveillance pathway
119218579
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119218579
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119218579
03041 Spliceosome [BR:
ppug03041
]
119218579
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119218579
TREX complex
119218579
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119218579
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
119218579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
FYTT
RRM_10
Motif
Other DBs
NCBI-GeneID:
119218579
NCBI-ProteinID:
XP_037329007
LinkDB
All DBs
Position
9:complement(13299574..13302279)
Genome browser
AA seq
259 aa
AA seq
DB search
MADKMSMSLDDIIKLNKKGGSGRGGRSSGGQAGSSGRAGGPSRPMRSRQNNFNRERNTRS
EPYTRPRELPDKWQHDMFEEHAGGHRGQSAVAERSVENGGKLLVSNLDFGVSDLDIKELF
AEFGTLQKASVHYDRSGRSKGTADVHFETKAEALKAMKHYNGVPLDGRPMKIQQMTSEVD
IESSPSTQSSNKGFDRSRLGQPKFERSERGDRGDRGERRQRGGGGGFRGRGRGGGNRPQL
SAEELDAQLDAYNAKMDTS
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagatgagtatgtctctggacgacattatcaagctaaacaagaaaggaggc
agtggtcgcggaggacggtcgtctggcgggcaggctggaagttcaggtcgggctggtgga
ccgtcaaggccgatgcggagtcgacagaacaacttcaaccgagaaagaaacaccagatct
gaaccgtacaccaggccccgagagttgccagacaaatggcagcatgacatgtttgaggag
catgctggtgggcacagaggacaaagtgcagtagcagaaagaagtgtagaaaacggcggc
aagctgctggtttctaatctggactttggcgtttctgacttggatatcaaggagttgttt
gcagaattcgggacgttgcagaaagcatctgtacactacgaccgctctggtcgcagcaaa
ggaaccgcagatgtccattttgaaacaaaggccgaagcactcaaagccatgaagcactat
aacggtgtcccacttgacggccgccccatgaaaatccagcaaatgacttccgaagtcgac
attgagagtagcccttctacacaaagttcaaacaaagggtttgaccgcagccgacttgga
cagcccaagtttgagagaagtgagcggggtgacagaggggaccggggtgaaaggaggcag
cgcggcggcggtggcggcttcagaggtcgtggaagaggaggcggaaacagaccccaactt
tcggcagaggagctggatgcccagttggatgcgtacaatgcaaagatggacaccagttag
DBGET
integrated database retrieval system
