Pungitius pungitius (ninespine stickleback): 119218591
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Entry
119218591 CDS
T07626
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119218591
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
119218591
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
119218591
NCBI-ProteinID:
XP_037329029
LinkDB
All DBs
Position
9:complement(16938860..16959918)
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AA seq
1934 aa
AA seq
DB search
MASPAAGRGVPKAPPRDESGTNHPAVPACLEAQKWIEAVTGKSFGDQDFRSGLENGILLC
ELLSAIKPGLVKKFNRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSIRANLK
DSDCNRKIKNVLNTVFWLGKAASGCASYSGPTLNLKEFEGLLAQMQVDCEEGGDASLKRG
VRDSGYDCWDSERSDSLSPPRHTRDNSLDSLDSFGSRSQHSPSPDVVNRGGADGRGSDSE
ADGATRRPDVRKDDMLARRTASGGDPRTSIPFNQFLPNRTNASSYIPTARRRPHPEEGEQ
RSRPRPPSEPSERTGLLLKAPKTVTWAPESTGEGVKQEQEEEEKGNQGALQQRRLAMLEK
AGVKVLPAAVGYSSPSAPEGREVRSPPSNIILRCENDFLSSQKSAWDSSSSSSSDADEEA
GARKVPDVRRDDLASRRARRGAVAPRVHQFVPAPACSSKDRERWEGIRRSSQQKEKEISE
KDAVPDIIRRRDNPFLNSASRPEDEEDGEEEGAEGTVEATPNKQRDDLARRRGRSGPLPP
RDGPVSLVPASMSEADVQKWQRLRMTEPSEASPAPVCRACLEQSHGSPFSGSAKAGRGHR
KAVTFGGVIEIEQPVDTVTPREGKEAELLRRLLFEAPVAVPTIGLGSQLSERERSQVDAA
DLNQTAPPSAETPSALAELDARLAQYELRRDEEDDDEEDRSPDPRKDDMMARRTGGFHRQ
SGAAVTYNRFLPLPSAARRTPGGGATDAAPRNKRAVRADGSRRPNVREELQPPRVAMETT
PPQHPDTTVTRATSRGECECEDDEDECGGNEPAADPEKDDMMARRTGSFQRTGSTAPVNR
FLPVPGSVKYTIAPVSAMKPLHNRPKLTEKMASGSIVTVAAEPQAPLSGAPTLPKGAGLR
ERREEDATQEGGMTSPRSHVTDVTEPPPSLTPPSSPPRICKVEAELERQGAQERVEERMK
DANGGPRRKAFWLDDDDLPPIMMSRRVAFMSEDTESVSMSDILNEEEVEHLPPLSQSRNE
RMHEPYNNFEEDDDHWQNDLARWKNRRRSASQELIKKEEERKRIEKRMKEEGSDGNKRKS
IKTYKEIVEEKERREAELCDAYRNASSPEEAAMVLQRYALRFTISDATLDSLKLPRSTAN
PKQDTPEPPVVIKPHRHHKPRQVTEANVGAQRETPGDPVSDSQSAGPQSPEAKEPRPQPT
PTTRPRQPAAGGAHTGPTGTARPSSAQPGHAAPSPPPAASKPVPLLAAKPYCPPRSTQPG
HKAVKMEGLVRVNGATTEDLSVSTPPTSALHSPPKAEDTPPKMAEEDVSSEKTQKDVLSK
QTEKDVLLEKTQNDVSLEETQKDDPLEKTQEDVFLEKTQEDVPLEKTQEDVLLEKTQVDV
PLEETQKDVLLEETQKDVLLEETQKDVPLEESQKDVFLEETQKDVPLEESQKDVFLEETQ
KDVPLEETQKDVLLEETQKDVPLEESQKDVFLEETQKDVPLEETQKDVLLEETQKDVPLE
ETQKDVLLEETQKDVPIEETQKDDPLEETQESLSSEPLEQAEKDVPAKHSEKDVLPEHIP
ASRETPERTPPPQTERSTTSLGSAISSLIGGRNCTVTTTIVTELTHVEPHQPDIQSNAQL
NGTSGLSESRVEEKKAPPASSPSSMQECSPTITATEGPEESSGTIETPMLNLAKRVNHWV
WDPNEERKRLESWQQEQERLLQEQYQREQEKLKQEWEKAQVEVQEEERKHNEEERRILEE
TGTPLNPLALLSQQTRTTASPPDNNEAAKCDVTPQQNGQRSSAGSEDQHASKLHFFQESA
FDGEPLKKQELWKTASLDRNPQLNPTHVAKRSESQDVVTNKQQPSTSSPQLPSPSRCVSG
KRLCSGCSQQLEKGAAMIIDTLGLFFHIQCFKCGVCHGQLGDATAGTDVRIRNGLLSCHE
CYIASRGRGQPTTL
NT seq
5805 nt
NT seq
+upstream
nt +downstream
nt
atggccagccccgcggcaggtcgaggtgtcccgaaggctccgccgagggacgagtccggg
acgaaccatcccgccgtgccagcttgtttggaggcgcagaaatggatagaggctgttact
gggaagagctttggagaccaggacttccgcagcggattggagaacggcatcctgttatgc
gagctgctgagcgcaatcaaaccaggactggtcaagaagtttaacagactgcccaccccc
atcgccggactggacaacctgtcagtgtttctgcgcggctgcgaggagttgggcctcaag
ggctcccagctgtttgaccctggggacttgcaagacacctccattcgagctaacctcaag
gactcggactgcaaccgcaaaataaaaaacgtgctgaacaccgtgttctggctcgggaag
gctgccagcggctgcgcctcctacagcggccccaccctcaacctcaaggagtttgaaggg
cttctcgctcaaatgcaggtggattgtgaggaaggaggcgacgcttcactgaagcgcggc
gtcagggacagcggctacgactgctgggactctgagaggagtgattctctgtctccaccg
aggcacactcgcgacaactccctcgacagtctggactcctttggctcccgctcacagcac
agcccttctcctgacgtggtgaatcgaggcggcgccgacgggcgaggcagcgactcggag
gccgacggtgccaccaggaggccggatgtgcggaaggatgacatgctggccagacggact
gccagcggcggcgaccccagaacctccatccccttcaaccagttcctccccaaccgaacc
aacgccagctcctacatcccgaccgcgcgccgaaggccacacccagaggaaggagagcag
cgcagtcgccctcgaccgccgtcagagccgtcggagagaaccggactcctcctcaaagct
cccaagactgtcacttgggcccctgagagtaccggggaaggagtcaaacaggagcaggag
gaggaggagaaggggaatcagggagcgttgcagcagaggaggctggcgatgttggagaag
gcaggggtcaaagttctgcctgctgccgttggctacagcagcccttccgcgccggaggga
cgggaagtgaggtcaccgccgtcaaacatcatccttcgctgcgaaaacgactttttaagc
tcccagaaatctgcgtgggactcctcctcctcctcctcctcggacgcggacgaggaggcc
ggggcgcgtaaggttcccgacgtccgcagagacgacctggcgtccaggcgagcccgtcgc
ggcgccgtggctcccagggtgcatcagtttgtccccgcgccggcgtgtagcagcaaagac
cgcgagcgctgggaaggcataagacgatcctcgcagcaaaaggagaaggagatcagtgag
aaagacgcagtgcctgacatcattagacgcagggacaaccctttcctgaactcggcgtct
cgccctgaggacgaggaggacggggaggaagagggggcagaggggacagttgaggccacg
ccgaacaagcagagggacgacttggctcgtaggcggggccggagcgggcccctccctccg
agggacgggcccgtgagcctggttcctgcctccatgagcgaggcagatgtgcagaagtgg
caaaggctcaggatgactgaaccaagcgaggccagcccggcccccgtgtgccgagcttgt
ctggagcaaagtcacgggagtcctttcagcggatcggcaaaggcgggacgaggtcaccgc
aaagcggtgaccttcgggggcgtgattgagatcgaacagccagtagacacggtgacacca
agggaagggaaggaggcggagttgctaagacgactccttttcgaggcccccgtagccgtg
cctaccattggcctgggctcccagctttcagagcgggaacgcagccaggtggatgcagcc
gacctcaaccaaaccgcacctccatcggccgaaaccccgtctgccctcgctgagctggac
gcgcgcctggctcagtacgagctgaggcgagacgaggaagatgacgacgaagaggacagg
tctccggatccccggaaagacgacatgatggcgaggaggacaggaggtttccacagacaa
agcggcgctgcggtgacttacaaccgcttcctgcctctgcccagcgccgcgcggcgcaca
ccgggggggggcgccaccgacgccgctccccgtaacaaaagggccgtgcgagcggacggg
agcaggaggcccaacgtcagagaggagctacagccgcccagggttgccatggaaacgacg
cctccacagcatcccgacacgactgtcacccgagcaacgtctcgcggcgaatgtgaatgt
gaagatgacgaggacgaatgtgggggaaatgagcctgcggctgacccggagaaggacgac
atgatggcccggaggaccgggtcgttccaaagaacgggttcaactgcgcccgtcaaccgc
ttcctgccggtccctgggtcagtaaaatataccatcgccccggtgtctgcaatgaagcca
ctgcacaacagacctaaactcacagagaagatggctagtggaagcatcgttacggtggca
gcagaacctcaggctccgctctccggcgccccgaccctccctaagggcgcggggctgagg
gagaggcgggaggaggacgccacgcaagagggaggcatgacaagccctcgcagccacgtc
acagatgtgacggagccccccccctcgctcacccctccatcatctccaccccggatctgt
aaagtggaggcggagctggaaaggcagggtgcgcaggaaagggttgaggagagaatgaag
gacgcaaacggggggccacgaaggaaagccttctggctggatgacgatgatctacctccc
atcatgatgagtcggcgtgttgcttttatgtctgaggacactgagagcgtgagcatgagc
gacatacttaacgaggaagaggtggaacacttaccgccactgagccaatcacggaacgag
cgaatgcacgaaccgtacaacaactttgaggaggatgacgaccactggcaaaacgacttg
gctcgttggaagaatcggcgccgcagcgcgtcacaggaactgattaagaaagaggaagag
aggaagaggatagagaaaaggatgaaggaggagggaagtgacggcaacaagaggaaaagc
attaagacctacaaagagatcgtggaggagaaggagcgcagagaggccgagttgtgcgac
gcctacaggaacgcttcgtccccggaggaggccgccatggtcctgcagcgctacgccctt
cgcttcaccatcagcgacgcgacactggacagtctgaaactgccccgatccactgcgaat
cccaaacaggacacaccagaaccacccgtggtcataaaaccccacaggcaccacaagccg
cgccaagtgacggaggcgaacgtcggcgctcagcgggagacccccggcgacccggtcagt
gactcgcagagcgcgggccctcagtcaccagaagcgaaggagcctcgaccccagccgacg
cccaccacgcgaccaaggcaaccggcagcgggcggcgctcacaccgggcccactgggacg
gcgcggccttccagcgcgcagcccggacatgcggccccctcgcctccgcctgcggccagc
aagcccgtccccctgctggcagccaagccctactgcccccccaggagcactcagcccggg
cacaaggctgtcaagatggagggtttggtgcgagtgaatggagcgacgacggaggattta
tccgtttccactcctcccacttctgctctccactcaccaccgaaggccgaagacactcca
ccaaagatggcggaggaagacgtttcctctgagaagacgcagaaagacgttctttccaaa
cagacagagaaggacgtcctcttagagaagacacagaatgatgtttccttggaggagaca
cagaaagacgatcccttagagaagacacaggaggacgttttcttagaaaagacacaggaa
gacgttcccttagagaagacacaggaagacgttctattggagaagacacaggtagacgtt
cctttagaggagacacagaaagacgttctcttagaggagacacagaaagacgttctctta
gaggagacacagaaagacgttcctttagaggagtcacagaaagacgttttcttagaggag
acacagaaagacgttcctttagaggagtcacagaaagacgttttcttagaggagacacag
aaagacgttcctttagaggagacacagaaagacgttctcctagaggagacacagaaagac
gttcctttagaggagtcacagaaagacgttttcttagaggagacacagaaagacgttcct
ttagaggagacacagaaagacgttctcttagaggagacacagaaagacgttcctttagag
gagacacagaaagacgttctcttagaggagacacagaaagacgttcctatagaggagaca
cagaaagatgatcctttagaggagacacaggaaagtctttcctcggagccattagaacag
gcagagaaagacgtccccgccaaacattcagagaaagacgtcctccccgaacacattccg
gcctctcgggagacgccggagcggacgccgcctccacagacggagcgatcgaccacgtct
ctcggctctgccatcagctccctgatcggaggccgaaactgtaccgtcacgacaaccatt
gtgaccgagctcacccacgtggagccacaccagccggacatccaaagcaacgcacagctc
aacggtacttctggattatctgagagtcgagtggaggaaaaaaaggctccgccagcttca
tcgccgagcagcatgcaagagtgttctcccacaatcacagccacagagggaccggaggag
agcagtgggactattgagacccccatgttgaacttggctaaacgtgttaatcactgggtc
tgggaccccaatgaggaacgtaaacgcctggaaagttggcaacaggagcaggagcgcctc
ctacaggagcaataccagagagaacaggagaagctgaagcaggagtgggagaaagcacag
gtagaagtgcaggaggaggagaggaaacacaacgaggaggagagaaggatcctagaggag
accgggacgcccttaaatccattggctttgttgagccagcagacaaggacgactgcatca
cctccagacaacaacgaggcagcaaaatgcgacgtgactccgcaacaaaacggccaaaga
agctcggcggggagcgaggatcagcatgcgtccaagctgcactttttccaggaatctgca
tttgatggtgaacctttgaagaaacaagagctgtggaagacggcctctttggaccggaac
cctcagctgaacccgacacatgttgctaaaagatctgaatcacaggacgtcgttactaac
aaacagcagccctctacttcctcacctcagcttccctcaccaagcagatgtgttagtggg
aagagactatgttctggttgttctcaacaactggaaaaaggagctgccatgatcatcgat
actctgggactgtttttccacatacagtgtttcaagtgcggggtgtgtcacgggcagctc
ggcgacgccactgccgggactgacgtgcgaattcggaatggactgctgagctgccatgag
tgctacattgcatctcggggcagaggtcagcccaccacactatga
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