Pungitius pungitius (ninespine stickleback): 119218745
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Entry
119218745 CDS
T07626
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119218745 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppug01007
]
119218745 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119218745 (vars2)
Enzymes [BR:
ppug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
119218745 (vars2)
Amino acid related enzymes [BR:
ppug01007
]
Aminoacyl-tRNA synthetase
Class I (U)
119218745 (vars2)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119218745 (vars2)
Prokaryotic type
119218745 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Parathyroid
Motif
Other DBs
NCBI-GeneID:
119218745
NCBI-ProteinID:
XP_037329260
LinkDB
All DBs
Position
17:complement(5374574..5399837)
Genome browser
AA seq
1073 aa
AA seq
DB search
MWRAGRVLRLTATGEASLCSSKPAKPSLSTSPQSNCSPRSQAEKQRRRREREEVILSNAH
SAAKDEAVRWSEKQKTVYAAQTPPGTKKDTLSPFPSSYCPEYVESSWYQWWEKEGFFRPE
QHEKLGHRVDQTFALCMPPPNVTGTLHLGHALTVAVEDALVRWRRMQGYRVLWVPGCDHA
GIATQTVVERRLLRDRGKRRQDFTRKQFLREVWEWKKETGDEIYHQLRRLGASLDWSRAC
FTMDPAFSRAVTEAFVRLSDSGLIYRSEALVNWSCALESAISDIEVDSKELSGRTMLSVP
GYDEEVEFGSLLTFAYPLEGHDGEVAVSTTRPETMLGDVAIAVHPDDPRYQCVHGKQCRH
PFTNQLLPIITDSMVDMELGTGAVKVTPAHDHTDFLLSQRHSLPRITVIGGDGTMTPPCG
KWLKGVKRFDARQMIVDALVEKGLFREKKTHPMTLPVCSRSGDIIEPLLKKQWFVSCEKL
AEKAIQAVEDRQLEIIPHYYTKTWNNWLSNISDWCISRQLWWGHQIPAYQVMFPNSSNKH
EELWVWGQNEDEARQRAAVKYGVKPEDITLTQDPDVLDTWFSSGLFPFAMLGWPEQTNDL
QRFYPSSILETGSDLLFFWVARMVMLGTELTGQLPFKQVLLHSMVRDKHGRKMSKSLGNV
IDPLDVIHGVSLERLQQKVKEGNLDPRERLVAMGAQKKDFPKGIPESGTDALRFALCSHK
MQGEDISLSISEVLSCRHFCNKMWQTLRFTLGVLGDNTTPVGTLEETSAVSSLDRWICSR
LYSTVVECETALEAYELHAVTSALYSFWVHSLCDVYLEYVKPVLLQQEEAALALPDRQAA
TSILYHCVSTSLALLSPFMPFITEELWQRLLPFQPQAAAQATLCLQPYPCSSQLAHWHFP
EEEKDFLLVQEVIRVARSLRAQCAMTKEKPAMWAVCSPSQAKVLHHFGSAVWTLSRISSL
HIYSPGAEPLLQVHSTPPPVGSLVGVVDHTCQLHLYIQSGMNIDKQILQLSQRRDKLVPK
LEKLLCRVQSPDYLSKAPAHVRQQMDTKTSALQQELKAIDDQLKVLQETQSKE
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcaggacgtgtcctgaggctgacagccacaggagaagcctccttgtgttcc
agcaagccagcaaaaccttctttgtccacttcacctcagtccaactgctctccgcggtct
caggcagagaagcagagacggagacgagagcgcgaagaggtcatactgtcaaatgcacac
tcagccgctaaagatgaagcagtgagatggagtgagaagcagaagacggtgtacgccgct
caaacgccgcccgggacaaagaaagacaccctgtctccattcccgtcttcttactgtccg
gagtatgtggagtccagctggtatcagtggtgggagaaagagggattctttcgtccagaa
caacatgagaagctgggtcaccgcgtggatcagaccttcgctctgtgcatgccgccacca
aacgtgactggtactctgcacctgggccacgctctcactgtagctgtggaggacgctctg
gttcgatggaggaggatgcagggctacagagtcctgtgggtccctggatgtgaccacgca
ggtattgcaacacagacggtggtggagaggaggctgctgagggacagaggcaagcgcaga
caggacttcaccaggaaacagtttctgcgtgaggtgtgggaatggaagaaggagaccggg
gacgagatctaccaccagctgaggaggctcggagcgtctctggactggagcagagcctgt
ttcaccatggatccagctttcagcagggccgtgactgaggccttcgtcaggctcagtgac
tcgggtctcatctaccgctcagaggctctggtcaactggagctgtgctctggaatcggcc
atctctgacatcgaggttgactcaaaggagctgtcgggacgaaccatgctgtctgttcct
ggttatgacgaggaggtggagtttggaagcctgctgaccttcgcctaccctttagaaggc
cacgatggagaggtggcggtgtccaccacccgtcctgagaccatgctgggagatgtggct
atagctgttcaccctgacgatcctcggtatcagtgtgtgcatgggaagcagtgcagacac
ccgttcaccaaccaactcctgcctatcatcactgattcaatggtggacatggagctggga
acaggtgccgtgaaggtaaccccagctcatgaccacacggacttcctgctgtctcagaga
cattcattgccacgcatcactgtgattggaggagatgggaccatgactccgccctgtgga
aaatggcttaagggagtgaagcggtttgatgccagacagatgattgtggatgccctggtc
gagaaggggctgttcagagagaagaagactcaccccatgaccttacctgtctgcagccgc
tcaggagacatcattgaacctcttctaaagaagcaatggtttgtaagctgtgaaaaactg
gctgaaaaggctatccaggctgtggaggacaggcagctggaaatcatccctcactactac
actaagacatggaataactggctgtccaacatcagtgattggtgcatttccaggcagctt
tggtggggtcatcagattcctgcttaccaagtgatgtttcccaattcttccaacaaacat
gaggagctgtgggtttggggacagaatgaggacgaggcccgacagagagctgccgttaaa
tatggagtgaagccagaagacatcacgttgactcaggaccctgatgtcctggatacttgg
ttctcctcagggctctttccctttgcaatgctcggctggcctgagcagaccaatgacctt
cagcgcttctacccgagctccattctggagacgggcagtgacctcctcttcttctgggtg
gcgaggatggtgatgctgggcacagagctgactggacagctgccctttaaacaggttctc
ctccactctatggtgagagacaaacatggcaggaagatgagcaaatctctgggaaatgtc
attgacccattagatgttatacatggagtttctctcgagaggcttcaacagaaagtgaag
gagggaaacctcgaccccagggagagactggttgccatgggagctcagaagaaagacttc
cccaaagggatccctgagtctgggactgatgctctgagattcgccctgtgctctcacaaa
atgcagggagaagacatcagtctgtccatctctgaggtcctgagctgcagacacttctgt
aataaaatgtggcagacgctgagattcacactaggagtgctgggtgacaacacaacacca
gtgggaactctggaggagacgagtgctgtgagcagtttggaccgctggatctgctccaga
ctctacagcaccgtagtggagtgtgagacggccctggaagcctacgagctgcatgctgtc
acttctgcattgtactccttctgggtccacagcctgtgtgacgtctacctggagtatgtg
aagcctgtgctgctccagcaggaggaagcggcgctggcccttcctgacaggcaggcggcc
accagcatcctgtatcactgtgtgtctacgtccctggccctgctctcccccttcatgcct
ttcatcactgaggagctgtggcagagacttctgccgttccaaccccaagctgctgcccag
gccactctgtgtttacagccgtacccctgctcctctcagctggcacactggcatttccct
gaagaggaaaaggatttcctactggtgcaggaagtgatccgagtggcccggtcactacga
gcccaatgtgccatgacaaaagaaaaaccagccatgtgggcagtgtgctcacccagccag
gccaaggtcctccatcactttggctcagctgtttggaccttaagccggatctctagcctt
catatctactctcctggagcggagccgctcctccaggtccactccacccccccacctgta
gggagccttgtcggcgtggtggaccacacatgtcaactacacctttacattcagagtgga
atgaacatcgataagcagatactgcagctcagccagcgcagagacaagctggttccaaag
ctggagaaactcctgtgcagagtccagtctccagactacctgtccaaggcccctgctcat
gtcaggcagcagatggacactaagacatctgctctgcagcaggagctgaaggccattgac
gaccaactgaaggtcctgcaggagactcaatccaaagagtaa
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integrated database retrieval system
