Pungitius pungitius (ninespine stickleback): 119218760
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Entry
119218760 CDS
T07626
Name
(RefSeq) small conductance calcium-activated potassium channel protein 1-like
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119218760
Ion channels [BR:
ppug04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
119218760
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
119218760
NCBI-ProteinID:
XP_062414494
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Position
17:complement(7220297..7228140)
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AA seq
724 aa
AA seq
DB search
MEHSPSMNLTVVDGDDVEDQRPLLPPRMALPPQTCPPQCGIHRMGQASADHTVWLDRTQA
MATTPLYNGHLYVTPSPRSNRRGDKEKRCEKRPGGRGQNPPHKECNHRCKDKNAAALKAQ
EKVTSFTDVLTPPRRGPCKGPCRSHIGIKDGEVRGRRKSGSVSLEMHDQQSLPEIIITSK
EDDFQPQNETFQHRQDPAEAQGLLPGAECPGPNPDTDSQSSPKHKEDNKADSYWKTHNIG
WRLVHRRALFLRRQRLNDCALAVGIFGMLLMVMETELSWSVYSKSSVYSLALKSIISLST
IILLGLIIAYHCCEIQLYVHDIGAEDWRIAMTTDRLALVCLELATAAIHPYPVGLMAYFQ
ETFQHSANRLMLSETELEIVLALPMFLRLYLLGRAMILHSRLLTDTASRSIGALNKIRFN
TRFVGKTLMTTYPGTVLMIFSVSLWIVAAWGLHVCERHHNYRDLSSNYMEALWMVSVTFL
SIGYGDVVPHTYCGRSICLLTGIMGAGCTVLVVAVVARKLELSRAEKHVHNFMMDSHISK
RIKIAAANVVRETWLIYKHTKLSRERDHSRVRMHQRKLLLAIHQLRQVKIEKRILADQGN
SLVDLCKVREASECIILNLQTEKKRTKKVATNISPPNMDLHTPLWTTMQMQNQMSDVLSE
VQGCRGELDTHIHSLEKHVEELREGFRSLMPLLSNTLSTQNSSIRHLLRERESKTESAGA
TVDR
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atggagcattcgccctctatgaacttgacagtggtcgatggagatgatgtggaggaccag
cggcccctcctcccgccgaggatggctctcccacctcagacctgccctccccagtgcggg
atacaccgcatgggccaagcgtcagctgatcacaccgtgtggctggacagaacccaggcc
atggccaccacacctttatacaacggccacctctatgtcacaccttcgccccgctccaac
aggaggggcgacaaagagaagaggtgtgagaagaggcccggggggaggggacaaaatccg
ccacacaaggagtgtaatcacaggtgcaaagacaaaaacgcagcagctctcaaagcccag
gagaaggtcacctccttcactgacgtccttacgcccccccgccggggaccctgcaagggc
ccctgcaggtcacacataggcatcaaggatggtgaggtcagggggcgccgcaagtcaggc
agcgtttctttggagatgcacgaccagcagagtctaccagagatcatcatcaccagcaaa
gaggacgacttccagccacaaaacgagacgttccagcatcgccaggacccggcggaggcc
cagggccttctgccaggagcggagtgccccggcccgaaccccgacaccgactctcagagc
agcccgaaacacaaggaggacaacaaagcggactcgtattggaagacccacaacatcggc
tggcggctggtccacaggagggctctgttcctgaggaggcagcggctgaatgactgcgcc
ttggcagtggggatattcgggatgctgttgatggtgatggagacggagctctcctggagc
gtctacagcaagagctctgtgtactccctcgcactcaagtccatcatcagcttgtccacc
atcatcctgctgggcctcatcatagcgtaccactgctgtgagatccagctctatgttcac
gacattggtgcagaggattggcggatcgccatgacaaccgatcgcttggccctggtgtgc
ctggagctggcaacggcggccattcatccgtatccagtgggtctgatggcctacttccag
gagaccttccaacactctgcgaatcgcctgatgctgtcggaaacggagctggagatcgtc
ctggccctgcccatgttcctcaggctctacctgctgggccgcgccatgatactgcacagc
cgcctcttaaccgacaccgcgtctcgtagcattggagcgctcaacaagatacgattcaac
acccggtttgtgggaaaaacgctaatgaccacctaccccgggactgtgctgatgattttc
agtgtgtctctgtggattgtggcagcgtggggtttacatgtttgtgaaagacaccacaac
tacagggacctgagcagcaactacatggaggccttgtggatggtctctgtcaccttcctg
tccatcggttacggagatgtggtgcctcacacctactgtggtcgaagcatctgtctcctc
acgggcataatgggagctggctgcaccgtcctggtggtggccgtggttgccaggaaactg
gagttgtccagagctgagaaacatgttcacaactttatgatggactcacacatctccaag
cggatcaaaattgctgcggcaaatgtggtgagagagacttggcttatctacaaacacact
aagctgtccagagagagagaccacagcagagtccgcatgcatcaacggaagctgctcctg
gccatccaccaactgcgccaggtgaagatagagaagagaatactggcagaccaagggaac
tcgcttgtggacttatgcaaggtgagagaggcaagtgaatgcatcattttaaacctccaa
acggaaaaaaaacgcacaaaaaaagtagcaactaatatttctcctcccaacatggacctt
catacgccattgtggacaacaatgcagatgcaaaaccagatgtctgacgtgctgtcagag
gtgcagggctgcaggggggagctggacacacacatccacagcctggagaagcacgtggag
gagttgagagagggcttcaggagcctgatgccgctcctgtccaacaccttgtccacgcag
aactcctccatccgccacctgctgagggagagggagtcaaagacggagagcgctggtgcg
accgtagacaggtag
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