Pungitius pungitius (ninespine stickleback): 119218861
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Entry
119218861 CDS
T07626
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X2
KO
K17925
sorting nexin-13
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119218861 (snx13)
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
119218861 (snx13)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
Motif
Other DBs
NCBI-GeneID:
119218861
NCBI-ProteinID:
XP_037329486
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All DBs
Position
17:12065219..12082847
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AA seq
954 aa
AA seq
DB search
MFAEASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYVFCFIGGGFAVTLLYGKINSEKHLE
KCEHSYLPPTQIGILKTLDEMKLEMKPIKIDRRLTGSSFIDEPLQQVIQFALRDYIQYWY
YTLSEDDSFLLEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATHLRVFRKAQDRLA
DREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSHKDEEGFLRDLCELLLYLLLPPGD
FHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYEAFMNILKLTDKA
AELEAVKDKVLEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRIQRLHSGKEVDAL
KLAANFGKLCVIPLDHILIHNIALQFFMDFMQLAGAQAELFFWLTVEGYRVTAQQQLEAM
QAWKTDGKKQPSATKGLLKAAALGVYEQYLSDKASPRVQVDEASVLTLGEKIQKDDPTPE
IFDEIQRNVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSDDGDGESFNGSPT
GSINLSLDDLSNSFHDETIHLHAFISDTGVCNDHGKTYALYAITVFRRSHDGSEDCWKTY
RRYSDFHDFHMRITEQFENLALILKLPGKKTFNNMDRDFLEKRKKDLNAYLQLLLNPEMV
KGCPTLIPYVYDFLENKAYSKGKGDFARKIDTLVNPLRSSMRNVSNAVKGLPDSLAEGMT
KVSDNMGRMSERLGQDIKQSILKVPPLLPKSEIDPEHCRVSAQLDDNVDDNIPLRVMLLL
MDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDTINRKIVDHVDYLTSPEQVADYVKKFRD
SYWPNGILAETLPRRDKSIRMRTRIAAKTSLLGIMPDELKHIIGADTTRKGILRVFDMFQ
YQPMNRRLVYVFLEGFLETMFPQYKFPELFVKLHSRSPRIHRYGQKLKSSSLKR
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcagaggccagtctgtccatctggggatgggggggtcttggagtcgtgctgttc
cttgtcacctttggaccctttgccatattctacctggccttttatgtcttctgcttcatt
ggagggggttttgcggtgactctgctctacgggaagatcaactcagagaaacacctggaa
aagtgcgagcattcttacctgccgcccacacaaattggtatactgaagacattggatgag
atgaagctggagatgaaacccatcaaaattgacaggagactgactggatccagtttcatt
gatgaaccactacaacaggtgatccagtttgctctgagagactacatccagtactggtac
tacactctgagcgaggatgattccttcttattggagatcagacagacgctacagaacgcc
ctcgtccagttctctacacggtccaaagaggtggactggcagccttacttcaccactcgc
ctggtggacgactttgccacccatttgcgtgtcttcaggaaagcccaggaccgactcgct
gacagagaggacaagcagagggacataacagaggagctggtggactccttctttgaggcc
gaggtggagatggaaaggaaaatttgtcgagacgtcgtatgcacctcacacaaagatgaa
gaaggttttcttcgggacttgtgtgagttgcttctctatctgttactacctcctggagat
ttccacaacaagaacatgagatacttcctacgggaggtgctggcccgtggtgtgctgctg
cctctgatcaaccagctcagtgacccagattacatcaaccagtttgtcatctggatgatc
cgggactctagctgtaactatgaagcctttatgaacatcctgaagctcacagacaaagcg
gctgagctggaggccgtcaaagacaaggtgttggaggagctgcagtacctccgctctctg
gacactgccggagatgacatcaatgtgatcaaaaaccagattaacagtcttctgtttgtg
aagaaggtgtgtgagaccaggatccagagactacactccggcaaggaggtggatgccttg
aagctggcagccaactttggcaagctgtgtgtcatcccactggatcacatcctcatccac
aacatcgccctgcagttcttcatggacttcatgcagctggcgggcgcgcaggcggagctg
ttcttctggctcaccgtggagggctacagggtgactgcacagcagcagctggaggccatg
caggcctggaagacggatggcaagaagcagcccagcgccaccaaagggctgctgaaggcc
gctgcgctgggtgtctacgagcaatacctctcggacaaggcgtctcccagggttcaggtg
gacgaagcatctgtgctaacgctaggggagaagatacagaaagacgaccccacgccagag
atattcgatgaaatccagagaaatgtgtatgacatgatgctgcgtgatgagcgctactac
ccgtccttcaagcagagtcctctgtacgtccgcatgctagcagagttagacatgctgaaa
gagccaagctaccgggggtctgatgacggcgatggtgaatcatttaatggctctccaaca
ggaagcataaacctatctttggacgacttgtccaactcctttcacgatgaaactatacac
cttcatgccttcatctccgacacaggggtgtgcaacgaccacggtaagacctacgcgctg
tacgcgatcaccgtgttccgacgcagccacgacggcagtgaggactgctggaagacctat
cgccgctactctgactttcacgacttccacatgaggatcactgaacagtttgagaacctg
gcgttgatcctcaagctgccgggaaagaagacattcaacaacatggacagggacttcttg
gagaagagaaaaaaagacctaaatgcgtacctacagttgctgctgaacccagagatggtg
aagggctgtccaacgctgattccctatgtgtatgacttcctagagaacaaggcctacagc
aagggcaagggagattttgcacgcaagatagacacattagtaaatcctctgaggagctcc
atgagaaatgtgtccaacgcggtaaagggcctcccagacagtctggctgaaggcatgacc
aaggtctctgataatatgggccgcatgtcagaaaggctgggtcaggacattaaacagtcc
atactgaaggtgcctcccctcctcccaaagtctgaaatcgaccctgaacactgtcgggtt
tccgcgcagctcgatgacaacgtggacgataacatcccgctgagggtaatgctgctgctg
atggacgaagtgtttgacctcaaggagaaaaaccagtggctgcgcaggaacatcaagaac
ctgctacagcagctcatccgggccacgtatggagacaccatcaaccggaaaatagtggac
cacgtggactacttgacgtcccctgagcaggttgcagactacgtcaagaagttcagggat
tcctactggcccaacggtatcctggctgagacgctaccccgccgggacaagagcatccga
atgaggacacgaatagctgccaagaccagtctgctgggcattatgccagacgagctgaag
cacatcatcggagcggacaccacgaggaaaggcatactccgcgtcttcgacatgtttcag
taccaacccatgaaccgtcggctggtctacgttttcctggagggcttcttggagacaatg
ttcccccagtacaaatttcccgagctctttgtcaagctgcactcccgctcgccacgaatc
cacagatacggccaaaaactcaaatcctcctccctcaagaggtga
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