Pungitius pungitius (ninespine stickleback): 119218918
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Entry
119218918 CDS
T07626
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119218918
Proteoglycans [BR:
ppug00535
]
Extracellular matrix (ECM) proteoglycans
Others
119218918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
DUF4959
VWA_3
Motif
Other DBs
NCBI-GeneID:
119218918
NCBI-ProteinID:
XP_037329604
LinkDB
All DBs
Position
17:17754961..17800265
Genome browser
AA seq
1853 aa
AA seq
DB search
MRSSVGLSLGLLGLFVVSLFPPPVGGQVQSPRRFRARILSPTQLHVSWKEPKGQFDSYKV
VYSTRPGGEQKEVEVSKQEAELLIDDFDPSQEYDFKVVALSGAQQSKPLQAKHEAQQSGV
EMVRSQRQDGRDNNDISEGEDEFMCKTVAISDIVILVDGSWSIGRINFRLVRTFLENLVR
AFSVEFDKTRIGLAQYSGDPRIEWHLNTHTTKEAVIDAVKNLPYKGGNTLTGLALTFILE
TSFKPESGSRPGVPKIGILITDGKSQDDVIPPARSLREAGIELFAIGVKNADENELKAIA
SPPEETHVYNVADFSVMSDIVESLTKTVCERVEQLDEQIKVGGNPAPPPVAMAPPRDLVT
SDITARSFRVTWTHAPGRVEKYRVVYYPASGGRPEEKVVQGAENAVELSYLNSLTEYQLA
VFAVYRSSASEALRGSATTLALPMVNDLQLFDISHSTMTVRWKAAAGASGYMILYAPLSG
GEPADEKEVKVEDTVNEVELEGLTPATEYTVTVYALYGEEASDPMTSQQTTLPLTPATNL
RFSDVDHSSSRVTWASASGKANGYRVMYVKTSGVQTNEVDVGRVTTWLLRNLTSLTEYTV
GVFAVYDEGQAEAATDSFTTKTVPDPQDLRSSDVSTDSFRVSWQHPASDVVMYRLSWTAS
EGGESQEVLVNGNINSYLIRGLRPLTQYEVVLGAVYANEAESEEVVLVESTVERTTTVAT
TTTTTATPRYGVRSMRVDEETTFSLRVSWQPMDPRNLRHYRLNYVSARGDRAEEQRMASA
GQNSLVLQPLLSDTEYQISVTPVYPDGDGPPAVRTGRTLPLSAPKNLRVSEEWYNRFRIS
WDVPPSPTMGYRVVYQPQSAPGPALETFVGEDVNTMLIVNLLSGTEYSVKVIASYTTGSS
EALSGGAKTLYLGVSGLDAYQVTVSSFCAQWQPHRHASSYRLLMESLPSGHKQETKLSGG
ANRHCFSSLKADTQYRLSVRAQLQDGTEGPEVSVTQRTLPVPTPKPTTPPTTTPLPTIPP
AKEVCKAARADLVFLVDGSWSIGDDNFLKIIRFLYSTAGALDRIGPDGTQVAIAQFSDDA
RTEFKLNSHSDKERLLDAINRIAYKGGNTKTGRAIQHVKENIFTAEGGVRRGIPNVLVVL
TDGRSQDDVNKVSKEMQMEGYIVFAIGFADADYGELVSIASKPSDRHVFFVDDLDAFTKI
EEKLVTFVCEAATATCPSVPMGGSSMPGFRMMELFGLVESRYSSVDGVSMVPGTFNTFPC
FHLHADAFLATPTRYIHPEGLPSDYTISLLFRLLPDTPEEPFALWEVLDQKNEPLVGVIL
DHGGKTLTFFNNDFKGDFQTVTFEGPDIKKLFYGSFHKLHIAISKTSAKVLVDCNAVEEK
SINAAGNISTDGAEVLGRKVRSRGNKDSSAPFQLQAFDIVCSTSWASRDKCCELPGLRKE
EDCPAMPKACTCTQDSKGPPGPAGPPGGSGIRGARGDRGEPGPVGPTGAVGDTGPPGPQG
PQGPQGHSGRSIIGPPGGPGERGQKGEAGQQGVQGLAGRPGAPGREGPAGPRGLPGNDGP
PGRPGPSGTIGTPGAPGAPGNTGSSGKPGDLGPPGLPGSKGERGERGDLQSTSSVQDIAR
QVCEQLIQSHMTRYNSILNHVPSPPVSIRTVPGPPGEPGRQGTPGPQGEQGPSGRPGFPG
QNGQNGQPGERGQSGEKGEKGSPGVGVQGPRGPPGPPGAQGQGRPGSQGPSGRPGNPGSP
GRPGNPGPVGSAGPPGYCDQNSCVGYNVGVQLPPNVFQNYGEVEEEDPYRFYEPNYPAPR
PVDPDDPEFQQDGVDLSSPGVARGARSTEGGRKKGVSLKGRVKGGAMTPPGLI
NT seq
5562 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcctcggtgggactgtccctcggcctgctgggcctctttgtcgtctccctgttc
cctccgccagtggggggccaagttcaatcgccgcggcgatttcgtgccagaatcctgagc
cccacccagctgcatgtgtcctggaaggagcccaaaggacagtttgacagctacaaggtg
gtttactccacgcgaccaggtggggagcaaaaggaggtcgaggtgtcgaagcaggaagcc
gagctgctcatcgacgactttgacccctctcaagaatacgactttaaggtagttgccctc
agcggagcacagcagagcaaacccctgcaggccaaacatgaagcccagcagtccggcgtc
gagatggttcggtctcagagacaggacggcagggacaacaacgacatctcagaaggggag
gacgagttcatgtgcaagactgtggccatatcggatatcgtcatcctggtggacggctcc
tggagcatcgggcgcatcaacttccggctcgtcaggaccttcctggagaacctggtcagg
gccttctcggtggagttcgacaagaccaggataggcctggctcagtacagcggagacccg
cggatcgagtggcacctcaacactcacaccaccaaagaggctgtgatcgatgcggtgaag
aacctgccgtacaaaggagggaacacgctgacaggtctggctctcaccttcatcctggag
accagctttaaacccgagtccgggtccaggcccggcgttcccaagatcgggattctcatc
acggacgggaagtcccaggatgacgtcatccctccggcacgcagcctcagggaggccggc
atcgaactgttcgccatcggtgtgaaaaacgcagatgaaaacgagctgaaggccatcgcg
tccccccccgaggaaacccacgtgtacaacgtggccgacttcagcgtgatgagcgacatc
gtggagagtctcaccaagacggtgtgtgagcgggtggagcagctggacgagcagatcaaa
gtgggggggaacccggcccccccgcccgttgccatggctccgccccgcgacctggtaacc
tctgacatcacggctcgcagcttccgggtgacgtggacgcacgcaccgggccgggtggag
aagtaccgggtggtgtactacccggccagcggggggcggccggaagaaaaggtggtgcag
ggggcggagaacgccgtggagctcagctacctcaactcactgacggagtaccagttggcc
gtcttcgccgtgtaccggagctcggccagcgaggcgctgagagggagcgccaccaccctg
gcgctgccgatggtcaacgacctgcagttgttcgatatctctcacagcaccatgacggtc
cgctggaaggccgccgccggggcttctgggtacatgatcctctacgcccccctgtcgggg
ggggaacccgcagacgagaaggaggtgaaggtggaggacacggtgaacgaggtggagcta
gaagggctgacgccggccacggagtacacggtgacggtgtacgctttgtacggagaggag
gccagcgaccccatgaccagccagcagaccacgttgccgctgaccccggcgaccaacctg
cgtttctcagacgtggaccacagctccagccgggtgacgtgggcctcggcctccgggaag
gccaacggctaccgcgtcatgtacgtcaagaccagcggagtccagaccaacgaggtggat
gttggccgtgtgaccacctggttgctaagaaacctgacctccctgacggagtacacagtc
ggggtcttcgccgtctatgacgagggacaagctgaggccgccaccgacagcttcactacg
aagaccgtccccgacccgcaggacctgaggagcagtgacgtctccaccgacagcttcagg
gtgtcatggcaacacccggcctccgacgtggtgatgtaccgactctcgtggacggcctcg
gagggaggagagagccaagaggttctggtgaacggaaacatcaacagctacctgatcaga
gggctccgccccctcacccagtacgaagtcgtgctcggcgccgtctacgccaacgaggcg
gagagcgaggaggtggtcctggtcgagtccaccgtcgagagaacaaccaccgtcgccacg
acgaccaccaccacagcaactcctcggtacggggtccggagcatgagggtcgacgaggag
accaccttcagcctgcgggtgtcctggcagcccatggaccccaggaacctccgccactac
cggctgaactacgtcagcgccaggggagaccgggcggaggagcagaggatggcctccgcg
ggtcagaacagcctggttctgcagcccctgctgtcggataccgagtaccagatctccgtc
acgcccgtttacccagacggagacggaccgccggcggtgcgcacgggacgaacacttcct
ctctcggctcctaagaacctgcgcgtatcagaggaatggtacaaccgcttcaggatcagc
tgggacgtcccgccgtcccccaccatgggctacagggtggtctaccagccccagtctgct
ccgggaccagctctggagaccttcgtgggggaggacgtgaacaccatgctgatcgtgaac
ctgctgagcgggacagagtacagtgtgaaggtcatcgcctcctacaccaccggatccagt
gaggccctctcagggggggccaagaccctgtacctgggggtcagcggcctcgatgcctac
caggtgacggtgagcagcttctgcgcccagtggcagccgcaccgccacgccagcagctac
cgcctgctgatggagtccctgcccagtggtcacaagcaggagaccaagctgagtgggggg
gccaaccggcactgcttcagcagcctgaaggccgacacgcagtacaggctgagcgtgagg
gcccagctgcaggacggcaccgaggggcccgaggtcagcgtcacgcagagaacactcccc
gtccccaccccgaagcccaccaccccccccaccaccacgccgttacccacaatcccccct
gctaaggaagtctgcaaggcggccagagccgacctggtcttcctggtggacggctcctgg
agcatcggagacgacaacttcctgaagatcatccgcttcctgtacagcaccgcgggggct
ctggaccggatcggcccggacggcacgcaggtggccatcgcccagttcagcgacgacgct
cgcaccgagttcaagctgaactcgcacagcgacaaggagcgcctgctggacgccatcaac
aggatcgcctacaagggggggaacaccaagacgggtcgagccatccagcacgtgaaggag
aacatcttcacggcggaggggggggtccggagggggatccccaacgtgctggtggtcctc
accgacggacgctcccaggacgacgtcaacaaggtgtccaaggagatgcagatggaaggc
tacatcgtgttcgccatcggcttcgccgacgctgactacggcgagctggtgagcatcgcc
agcaagcccagcgaccggcacgtcttcttcgtggacgacctggacgccttcacgaagatc
gaggagaagctggtgacctttgtgtgcgaagccgccaccgccacgtgtccgtccgtaccg
atgggcggcagcagcatgccaggtttccgcatgatggagctgttcgggctggtggagagt
cggtacagcagcgtcgacggcgtttccatggtacccggcaccttcaacaccttcccttgc
ttccacctgcacgccgacgccttcctggcgacgcccaccaggtacatccaccctgaaggg
ctgccctcggactacaccatcagcctgctgttcaggctgctgcccgacacccccgaggag
cccttcgccctctgggaggtgctggaccagaagaacgagccgctggtgggcgtcatcctg
gaccacggagggaagacgctgacgttcttcaacaacgacttcaaaggagacttccagacg
gtgaccttcgaagggcccgacatcaagaagctcttctacggcagcttccacaagcttcac
atcgccatcagcaagacgagcgccaaggtgttggtcgactgcaacgccgtggaggagaaa
agcatcaacgcggcgggaaacatcagcacggacggagcggaggtcctcgggaggaaggtc
cggtcccgagggaacaaggacagctcggccccgtttcagctgcaggcctttgacatcgtg
tgcagcacgtcgtgggccagcagagacaagtgctgcgagctccctggtctgaggaaggag
gaggactgcccggctatgcccaaagcctgcacctgcacccaggacagcaaaggccccccc
gggccggccggacccccgggaggctcaggcatcagaggagcccgaggagatcgtggagag
ccaggtccagtggggccgaccggggccgtgggggacacgggtccgccaggacctcagggg
ccacaggggccgcagggccacagcgggcgctccatcatcggacccccgggaggtccagga
gagcgaggacagaaaggtgaagcgggacaacaaggcgtgcagggactggctggaagacct
ggagctccaggcagagaaggacccgcaggacccaggggcctgccgggtaatgacgggccc
ccgggccgaccgggcccctcaggaaccatcgggacgccaggagccccgggggccccaggt
aacaccggctcttcagggaaaccaggagatctgggacctccgggtcttcctggaagcaaa
ggcgagagaggtgaacggggggacctccagtcgacctcgtccgtccaggacatcgccagg
caggtctgtgagcagctgatccagagtcacatgacgcgctacaactccatcctcaaccac
gtgcccagtccaccagtttccatccgcactgtgccaggaccccccggggagcccggcagg
caggggaccccggggccccagggagaacagggaccctcgggtagaccgggcttcccagga
cagaacgggcagaacgggcagcccggagagagaggtcaatcaggagaaaagggtgagaaa
ggatctccaggcgttggagtccaaggcccccgaggacctccaggaccccccggtgcccag
gggcaaggcagacctggcagccagggtccgtcagggcgacccgggaaccccggctctcct
ggtcggcccggtaaccccggacccgttggctccgccgggcctccgggctactgcgaccag
aactcgtgtgtgggctacaacgtgggagtccaactgccgcccaacgtcttccagaactac
ggcgaggttgaggaggaggacccctaccgcttctacgagcccaactacccggccccgcgc
cccgtggaccccgacgacccggagttccagcaggacggcgtcgacctgagctcccctggc
gtggcccgcggtgcccgcagcacggagggggggcgcaagaaaggagtcagcctgaagggg
agggtaaagggaggtgcgatgacgccgcccggactaatttaa
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