Pungitius pungitius (ninespine stickleback): 119218963
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Entry
119218963 CDS
T07626
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119218963 (zgc:91944)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
119218963 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
AbiJ_NTD3
HTH_3
Motif
Other DBs
NCBI-GeneID:
119218963
NCBI-ProteinID:
XP_037329678
LinkDB
All DBs
Position
17:16192054..16201131
Genome browser
AA seq
502 aa
AA seq
DB search
MRQWCVPSATPRTEALPGRLSVSPPPPDARMECCEVEPRYTIEQIDLLQRLRLSGMTKPQ
IIHALESLERLDPDRRPPRCDSQPATSNNAPAPAPAATAAAPAPSSSTSSSSSLSLASAT
TQTSGLDGAALSPSNSYEASPPPLYPPSVAVQRSFSYDMMGEEEWDLEEKVEEYMRRDSN
LVKEEIKTFLNNRRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNN
PGLRWSESQHSVSPRARGGDRDGTVAGASGCLPNPNTNLNPNPVWSRQRELLMHLLPWYT
AAAAAAQAQPGATLSMRSLVKEEPDWRTGIMAGDRVGAVGGPLRLRRGSRFTWRKECQSI
MESFFVENQYPDEAKREEIANACNSVIQKPGCKLSEFERVTALKVYNWFANRRKEMKRRA
NIEAAILESHGIEVPSPSGHSNGEEGELQEFAEQEEASSHRIVDQQDPSSLATREAAAPP
SPHPQVPDRKEELAKRETVDEE
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgtgtcccctccgcgacccctcgcaccgaagccctcccggggcggctg
tccgtgtcaccccctccaccagatgccaggatggagtgctgcgaggtggagccgcgctac
accatcgagcagatcgacctcctgcagcgcctgcgtctctccggcatgaccaagcctcag
atcatccacgccctggagtccctggagaggctggacccggaccgccgcccgccccgctgt
gactcccagcccgccacgtccaacaacgccccggcccccgcccccgccgccaccgccgcc
gccccggccccgtcctcctccacgtcctcctcctcctcgctgtccctggcctccgccacc
acgcagacctccggcctggacggcgccgcgctgtcccctagcaacagctacgaggcgtct
cctccgcccctctaccctcccagcgtggcggttcagcggtccttcagctacgacatgatg
ggggaggaggagtgggacctggaggagaaagtggaggagtacatgaggagagacagcaac
ctggtgaaggaggagatcaaaacgttcctcaacaatcgcaggatctctcaggccatcgta
ggccaagtcacaggcatcagccagagctacatctcccagtggcttctgcagcagggcctg
gagatgagcgactccaagcgccgcgccttctaccgctggtacctgctggagaggaacaac
ccggggctgaggtggagtgaaagccagcacagcgtgagtcccagggccaggggaggggac
agagacgggacggtggcgggggccagcggctgcctccccaaccccaacaccaacctcaac
cccaacccagtgtggagcaggcagagagagctgctgatgcacttgctgccgtggtacact
gcggccgccgccgccgcccaggcccagccaggggccacgctgtccatgcgctccctggtg
aaggaggagcccgactggaggacggggatcatggcaggcgaccgagtgggggcggtgggc
gggcctctgaggctgcgcagggggagcaggttcacctggaggaaggagtgccaatcaatc
atggagagtttcttcgtggagaaccagtacccggacgaggccaagcgagaggagatcgcc
aacgcgtgtaactccgtcattcagaaaccaggctgcaagctgtctgagtttgagcgcgtc
acggcgttgaaggtgtacaactggtttgccaaccgccggaaggagatgaagaggagggcg
aacatcgaagccgccattttggaaagccacggaattgaggtgccgagcccgagcggccac
tcgaacggcgaggagggagagctgcaggagtttgccgagcaggaggaagcctcttcccac
aggattgttgaccaacaagacccatcgtcgttggcgaccagggaggccgcggccccgccg
agcccccaccctcaggtccctgatcggaaagaggagctcgccaaaagggagacggtggac
gaggagtga
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