Pungitius pungitius (ninespine stickleback): 119218969
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Entry
119218969 CDS
T07626
Symbol
irx1b
Name
(RefSeq) iroquois-class homeodomain protein IRX-1b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119218969 (irx1b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
119218969 (irx1b)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
119218969
NCBI-ProteinID:
XP_037329688
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Position
17:complement(16571182..16575239)
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AA seq
467 aa
AA seq
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MSFPQLGYPQFLGASHEMYGGERPASAREGAAEGGLSSSATAAAVGSMLGMYGSPWAAHN
YSAFLPYSGAADLALISQMGSQYELKDSPGSHPASLPVHAAQGFYPYGQYPYGDPSRAKT
ATRETTSTLKAWLQEHQKNPYPTKGEKIMLAIITRMTLTQVSTWFANARRRLKKENKVTW
GRSAEDRDGRIFSSDNEDDHGKNGSDDEDEEEEIDLETVDIERPEEQRAGEQASGKGEVE
AECGDEGEGEAGLADREQASEPKSSESSRTLSAEGPRGLEAAVPLNRSPVVKLAVDRSPS
RQECQRPPQSKPKIWSLAETATAPDSSHRPSPAAHAHHPALASAGHPALLSGHGIYTCQI
GKLHNWANAAFLNANSLLNMRSLLGGAPAGHLPLHGAVPVARHDARPAAATSGTEDDSDV
ESSGSFSPKRDDEESDHRPESLKSPFQRISDRPHHGTAPQRVVTTTL
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtctttccctcagctggggtacccccagttcctcggcgcgtcccatgagatgtacggg
ggtgagcggccggcctccgcccgggaaggagccgccgagggcggcttgagctcgtccgcc
accgccgccgccgtcggctccatgctggggatgtacggaagcccgtgggcggcccacaac
tacagcgccttcctgccgtacagcggagccgcggacctcgccctcatatcgcagatgggc
tcccagtacgagctgaaggacagcccggggtcccaccctgcctcactgccggtccacgcc
gctcaaggcttctacccatacggccagtacccgtacggggacccgtcgagggccaagacg
gccacccgggagaccaccagcaccctgaaggcctggctgcaggagcaccagaagaacccc
taccccaccaaaggagagaagatcatgctcgccatcattacacggatgacactcacacag
gtttcgacgtggttcgcgaacgcgcgcagacgcctgaagaaggagaacaaggtgacctgg
ggccgcagcgccgaggaccgggacggccgcatcttcagcagcgacaacgaggacgaccac
ggcaagaacggcagcgacgacgaagacgaagaggaggagatcgatctggaaactgtcgat
atcgaaagacccgaggagcagcgagcgggggagcaggcctccgggaagggagaggttgag
gcagagtgcggggacgagggagagggagaggccggcctggccgacagagagcaggcctcc
gagccgaagagctccgagagcagcaggacgctttccgcggagggcccgcggggactggag
gcggccgttcccctcaacagatcgcctgtggtcaaacttgcggtggatcgttcccccagc
agacaggagtgccagagaccaccgcagagcaaacccaaaatctggtccttggctgagacc
gccacggccccggacagctctcacagaccttcccccgcggcccacgcgcaccacccggct
ttggcctccgccggccacccggccttgctctcgggtcatgggatttacacgtgccagatt
ggcaaactgcacaactgggccaacgcggcttttctgaacgccaactctcttttgaacatg
aggtcgctcctcggaggggcgccggccggacacctgcctctccacggagcggtgcccgtt
gcgcgtcatgacgcacggccggcggcggcaacttcggggacggaggatgacagcgatgtg
gagtcgtcgggaagcttcagtccaaaaagagatgacgaggagagcgaccacaggcccgag
tccctgaagtccccgttccagcggatatctgacagacctcaccacggcacagcaccacag
cgagttgtgacaacgacgttatga
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