Pungitius pungitius (ninespine stickleback): 119218982
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Entry
119218982 CDS
T07626
Name
(RefSeq) E3 ubiquitin-protein ligase RING2-A-like
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
119218982
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119218982
03036 Chromosome and associated proteins [BR:
ppug03036
]
119218982
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119218982
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119218982
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
119218982
Noncanonical PRC1 (PRC1.1)
119218982
Noncanonical PRC1 (PRC1.3/1.5)
119218982
Noncanonical PRC1 (PRC1.6)
119218982
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
Zn_ribbon_Top1
zf-C3HC4_5
DUF6555
Sina_RING
Hid1
Motif
Other DBs
NCBI-GeneID:
119218982
NCBI-ProteinID:
XP_037329717
LinkDB
All DBs
Position
17:complement(17945413..17951122)
Genome browser
AA seq
384 aa
AA seq
DB search
MAAPVNIQTASKTWELSLYELHRSPQEAIMDGTEVAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSRRSLRRDSNFDALISKIYPSRDEYEAH
QRRVLERLNRLHNKEALSSSIEEGLRQQARYRNHRVKKPTQESDNTTFSGGEDNGDARSH
LSHDSAPSQAPPPAGRNPSEAGPSRKRPRASDEGSGAEADSGSPPDPPPRRHKEQPASEI
ELVFRPHPELVQAEDYSQTRYVKTTANATVDHLSKYLALRIALEDRQTEGATEEAGGPGG
EGLRNISEKQYTIYIMTRGGQFSTLNGSLTLELVNEKYWKVRKPLELFYAATKDQQPPPE
TEGGVSPSPHPPEEMVWRSSTTRF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccggtgaacatccagactgccagtaagacctgggagctgagtctgtatgag
ctccacaggagccctcaggaggccatcatggacgggacggaggtggcggtgtccccccgc
tctctgcacagcgagctgatgtgtcccatctgtctggacatgctgaagaacaccatgacg
accaaagagtgtcttcaccgcttctgctccgactgcatcgtcacggcgctgcgttcaggg
aacaaagagtgtcccacctgcaggaagaagctggtctcccggcgctcgctgcgccgagac
tccaacttcgacgcgctgatctccaagatctacccgagccgggacgagtacgaggcccac
cagcgccgcgtgctggagcgcctcaaccggctgcacaacaaggaggcgctgagctccagc
atcgaggaggggctccggcagcaggcccgctacaggaaccaccgggtgaagaagcccacg
caggagagcgacaacaccaccttcagcggcggggaggacaacggcgacgctcgttcccac
ctgtctcacgactccgccccctcgcaagcccccccgcctgcgggccggaacccctcagag
gccgggccgagccgcaagcggccgcgggcgtcggacgagggctccggggccgaggcggac
agcggcagcccccccgacccgccgccacgccgccacaaggagcagccggcctcggagatc
gagctggtgttcaggccgcacccggagctggtccaggctgaggactacagccagaccagg
tacgtgaagacgacggccaacgccaccgtggaccacctctccaagtacctggctctccgc
attgccctggaggaccggcagacggagggggccacggaggaggccggaggaccaggagga
gagggtctgaggaacatcagtgagaaacaatacaccatctacatcatgaccagagggggg
cagttctctacgctgaatggctctctgactctggagctggtcaacgagaagtactggaag
gtgaggaagcctctggagctcttctacgccgccaccaaggaccagcagcccccccccgag
acagaaggaggggtgagcccctccccccaccccccggaggagatggtgtggcgctcttca
accacacgcttttga
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