Pungitius pungitius (ninespine stickleback): 119219083
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Entry
119219083 CDS
T07626
Symbol
sall3b
Name
(RefSeq) sal-like protein 3b
KO
K19871
sal-like protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119219083 (sall3b)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119219083 (sall3b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
119219083 (sall3b)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
119219083 (sall3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-met
B129_C2H2-zf
zf-C2H2_6
zf-C2H2_11
zf-C2H2_15
UBZ_FAAP20
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
119219083
NCBI-ProteinID:
XP_037329867
LinkDB
All DBs
Position
17:complement(2187392..2196049)
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AA seq
1240 aa
AA seq
DB search
MSRRKQAKPQPLRSEEEATCSGLLVASGTTALCDEGEETERRRHSCEDTHTCDKCCAEFL
TRTELSEHHTVCTEHPLVLIVKGDDGAPALEESPAGASPVPSVASSDSSVAGSLHAGFEP
RETPAKDNVSLDDLEDGDVESVEAMEFERDKYADLAESAPAAQVPAAGGHGVSTNVTLEI
LHSTRVAVAQFSQGVGRAATGAKAASAAIPAILDHLLALQQQQVHQLQLIEQICSQVAVM
NRHPAQAALNPLTRSLSLAPNPSPCRGTASPPVPPLSGAMPPAVGGQAAASLEKSRGLPS
STVCQSALRDVTCTSAPSEKTSPPLSSCGSGALLPPYAGPHAGAVSCPQTLSSSCTLPLG
PSSLLSSSSSLPFLPQSPPSGVIFPNPLASIAATANALDPLAALMKHRKGKLPSAPLFET
KPGPEEPFFKHKCRFCAKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQR
HKEKYPHIQMNPYPVPEYLDNVPTSSGIPYGMSFPPEKPSSSWLESKPVVAALPVGLPLS
STITSTGGSNDSVSVTPSVKSPCQPGPGECVSLSPNHRGSEADLSPVSPSPRSHYETDAP
NILQTEGVHLPQNCFLRLKATPVTEATSTTMPPLATTPEPVPSASPVPRSPTLSCSQDEA
KFQTGGLLDSMQPSETSKLQQLVENIDRKITDPNQCVLCHRVLSCQSALKMHYRIHTGER
PYKCKVCGRAFTTKGNLKTHVSVHREDAPVQVQHSCPICQKKFTNAVVLQQHIRMHMVGP
VPDSTLVDGLQEMDVEAYLNERSFNSLSSNDNDLVDDVSMEDEDEEEEVENMEDVVNPSK
PLIFECNSPPKSPSIVYSLAALENQMRMIDSALSLNHSFAIKPLANGFNDLNGKNNTKYS
PPEKRPQNCSANASESSRSPRVCVSPGPSSSEGLTVNPTPVSSKRPEPQEPSAASVKREQ
CESPPSAAAQELRGIRAGELCVKQETPYCMSFQLSRERAAGHSIPIQVTSTPSGLVKAEV
NGRGPPITPSEGQHPPFSVHVPPAYAPGVASSLLGPPPSRRMPKQHNCNACGKNFSSASA
LQIHERTHTGEKPFVCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVENPIALLSG
EAGKFGEMFQKDLAARAMNVDPGFWNRYATAIANSLATKNNEISVIQNRGISQLHPLTAG
MNRVSTTGSPITSLTKTGMDLGNNRHFSMLIDDSKEIGIN
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcgcaagcaagccaagccgcagcccctccggtcagaggaagaggcgacgtgc
agcggactcctcgtcgcgagcggcaccacggccctctgtgacgagggagaggagaccgaa
agacgccgccacagctgcgaggacacacacacctgtgataaatgctgtgccgagttcctc
actcggactgaactgagtgaacatcacacagtctgcactgagcatcccttggtgctgata
gtaaagggcgacgacggggcgccggctctggaggagtctcctgccggagcctctccggtt
cccagcgtggcgtccagtgactcatccgtggccgggtccttgcatgcgggatttgaaccg
cgggagacgccggccaaggacaatgtcagcctggacgatttagaggacggtgacgtggag
agcgtcgaggccatggagttcgagcgggacaaatacgcggatctggccgagtccgccccc
gccgcccaggtgccggctgccggcggccacggcgtgagcacaaacgtgacgctggagatc
ctccacagcaccagggtggccgtcgcccagttctcccagggggtcggcagggctgccacc
ggggccaaggcggcttcggcggccatcccggccatcctggaccacctgctggctctgcag
cagcaacaggtccaccagctgcagctcatcgagcagatctgcagccaggtcgcagtcatg
aaccgacacccggcacaggcggcgctgaacccgctcacccgatctctgtccctggcgccg
aacccttccccttgccgaggcaccgcctcgcctcccgtcccgccgctgtcgggggcgatg
ccccccgctgtcggcggccaggccgcggcgtctctggagaagtcccgcggtctcccctcc
tcaactgtatgtcagtccgccttgagagatgtgacgtgcacctcggctccctcggaaaaa
accagccccccgctctccagctgcggcagcggcgcgctgctgcctccctacgcgggcccg
cacgccggcgccgtgagctgtccccagacactgagctcctcctgcactctccccctgggg
ccgagcagcctcctcagctcatcctccagcctcccatttctacctcagagccccccgagc
ggcgtcattttccccaatcccctggcgagcatcgccgccacagccaacgcacttgacccc
ctcgcagccctgatgaagcacaggaagggcaagctgcccagcgcgcccttgttcgaaacc
aagcccggcccagaagaacccttcttcaagcataaatgcagattctgtgccaaagtgttt
ggcagcgacagcgctctgcagatccacctgcgctcccatacaggggagcggcccttcaag
tgcaacatctgcggcaatcgcttctccacaaaaggcaacctaaaggtgcacttccagagg
cataaagagaagtatcctcacattcagatgaacccttacccggtaccagagtacctggac
aatgtgccaacaagttctgggattccctacggaatgtccttccctccagaaaaaccctcc
tcctcgtggctggagagcaaacctgttgtagcagctctgccagtgggccttccgctttcc
tccactattaccagcaccggaggctcaaatgactctgtaagcgtaacaccatccgtcaaa
tctccctgccagccaggcccgggtgaatgtgtatctttgtcacccaaccacaggggcagt
gaggcggatctctctcctgtttcgccgtctcctcggtcccactatgaaacagacgcgccc
aatatactgcaaacagagggggtgcacctgccccagaactgcttcctgagactaaaagcc
accccggtaacagaagcaaccagcacaacgatgccgcctttggccaccacgccagaaccc
gtcccctcggcgtcccccgtccctcgctccccgaccctttcgtgcagccaagacgaagct
aaattccaaaccggaggcttactggactctatgcaaccgtccgaaacctcaaagctccag
cagctggtggagaacattgacagaaagatcacggaccccaaccagtgtgtcctctgtcac
cgcgtcctcagctgccagagcgcgctgaagatgcactaccgcattcacaccggggagaga
ccctacaaatgcaaagtgtgcggcagggctttcaccaccaaggggaacctgaagacccac
gtcagtgttcaccgagaagatgcccccgttcaagtgcagcactcttgtcccatttgccag
aagaagttcaccaacgcggttgtccttcagcagcatatccgcatgcacatggtgggaccg
gttccggactcgaccctggtggacgggctgcaggagatggacgtcgaagcatacctcaac
gagagaagctttaacagcctcagcagcaacgacaatgaccttgtggatgatgtctcaatg
gaggacgaggacgaggaagaggaggtagaaaacatggaagatgttgttaatccatccaaa
cccttgatttttgaatgtaattctcctcctaagtcccccagcattgtttacagtttagct
gcactggagaaccaaatgaggatgattgactccgctttgagcctaaaccactccttcgcc
ataaaacccctggcaaatggcttcaatgacttgaatggcaaaaacaacacgaaatactcg
ccacctgagaaaaggccacagaattgcagcgccaacgcgtcggagtcgtcccgttcgccc
cgcgtgtgcgtgtccccgggtccgagcagctccgagggcctgaccgtgaaccccactccg
gtgagcagcaaaaggccagagccccaggagccttctgcagcctcggtgaagagggagcaa
tgcgagtctcctccctctgcagcggcgcaggagctgagaggaatacgggccggagagctc
tgtgtgaaacaggagactccttattgtatgtccttccagctgagcagagaaagagccgca
ggtcacagcatccccatccaggtcaccagcacgccgtcgggcctggttaaagccgaggtg
aacggtcgcggccccccaatcaccccgtccgagggccagcacccaccgttcagcgtccac
gtccccccggcgtacgccccgggagtggcctcctccctcctcggcccgccgccctcccgg
cgaatgccgaagcagcacaactgcaacgcctgcgggaagaacttctcgtcggccagcgcc
ctgcagatccacgagcgcacgcacaccggagagaagccgttcgtgtgctccatctgcggc
agggctttcaccaccaaaggcaacctgaaggtccacatgggaactcacatgtggaataac
gcgccggccaggagaggtcggcgtctgtcggtggagaaccccatcgccctgctgagtggg
gaggcggggaagttcggagagatgtttcagaaggacctggccgctcgagcaatgaatgta
gaccccggattttggaaccgctacgccacagccatcgccaacagcctggccaccaagaac
aacgagatctcagtgatccagaacagaggcatctctcagctgcaccctctgactgcaggc
atgaacagagtgagcaccacaggaagcccgataaccagtctaaccaagaccggcatggac
ctgggaaataataggcatttttctatgctcatcgatgatagcaaagaaattggaatcaat
tga
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