Pungitius pungitius (ninespine stickleback): 119219089
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Entry
119219089 CDS
T07626
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119219089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119219089
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119219089
03012 Translation factors [BR:
ppug03012
]
119219089
04131 Membrane trafficking [BR:
ppug04131
]
119219089
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119219089
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119219089
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119219089
Translation factors [BR:
ppug03012
]
Eukaryotic type
Elongation factors
119219089
Membrane trafficking [BR:
ppug04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119219089
Exosome [BR:
ppug04147
]
Exosomal proteins
Proteins found in most exosomes
119219089
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
119219089
NCBI-ProteinID:
XP_037329879
LinkDB
All DBs
Position
17:2896248..2899740
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETSRYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASDKMGWFKGWKVERKDGNANGTTLLEALDAILPPAR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVVTFAPANLTTEVKSVEMHHESLT
EAMPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKGADNFNAQVIILNHPGQINAGYAPV
LDCHTAHIACKFSELIEKIDRRSGKKLEDAPKFVKSGDAAIVKLIPQKPMVVEPFSNYPP
LGRFAVRDMRQTVAVGVIKAVECKETSGKTTKAAEKAQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcatcggccatgtcgactccggcaag
tccacctccaccggtcatctgatctacaaatgcggaggaatcgacaagagaaccatcgag
aagttcgagaaggaagccgctgagatgggaaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgcgagcgtggtatcaccatcgacatcgctctgtggaagttc
gagaccagcaggtattacgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcaccggcacctctcaggctgactgcgccgtgctgatcgttgctgccggtgtc
ggtgagttcgaggccggtatctccaagaacggtcagacccgcgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccctacagccaggcccgtttcgaagaaatccagaaggaagtgagcacttacatcaagaag
atcggctacaaccccgccaccgtcgcctttgtccccatctctgggtggcacggagacaac
atgctggaggccagcgacaagatgggctggttcaagggatggaaggttgagcgcaaggac
ggcaacgccaatggaaccacactgctggaggctctggatgccatcctgcccccagctcgt
cccacagacaagcccctgcgtctgcccctgcaggatgtctacaaaatcggaggtattgga
actgtaccagttggccgcgttgagaccggcatcatcaagcccggcatggtcgtcaccttc
gctcctgccaacctgaccactgaagtaaagtctgttgagatgcaccacgagtctctgacc
gaagctatgcccggtgacaacgttggcttcaacgtcaagaacgtgtccgtcaaggaaatc
cgtcgtggatacgtggccggagacagcaagaacgacccccccaagggagccgacaacttc
aacgcccaggtcatcatcctgaaccaccctggccaaatcaacgcaggttacgcccccgtg
ctggactgtcacaccgctcacatcgcctgcaagttcagcgagctcatcgagaagattgac
cgtcgttctggcaagaagcttgaggacgcacccaagttcgtcaagtctggcgatgcagcc
attgtcaaactgatcccacagaagcccatggttgtggagcccttctccaactaccctccc
ctcgggcgtttcgctgtgcgtgacatgaggcagaccgtggccgtcggtgtcatcaaggcc
gttgaatgcaaggaaacatccggaaagacaaccaaggctgcagagaaggcccagaagaag
aaatga
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integrated database retrieval system
