Pungitius pungitius (ninespine stickleback): 119219090
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Entry
119219090 CDS
T07626
Name
(RefSeq) elongation factor 1-alpha-like isoform X2
KO
K03231
elongation factor 1-alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119219090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119219090
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119219090
03012 Translation factors [BR:
ppug03012
]
119219090
04131 Membrane trafficking [BR:
ppug04131
]
119219090
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ppug04147
]
119219090
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
119219090
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
119219090
Translation factors [BR:
ppug03012
]
Eukaryotic type
Elongation factors
119219090
Membrane trafficking [BR:
ppug04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
119219090
Exosome [BR:
ppug04147
]
Exosomal proteins
Proteins found in most exosomes
119219090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
GTP_EFTU_D4
MMR_HSR1
Gtr1_RagA
Semialdhyde_dhC
Motif
Other DBs
NCBI-GeneID:
119219090
NCBI-ProteinID:
XP_037329880
LinkDB
All DBs
Position
17:2906385..2910222
Genome browser
AA seq
461 aa
AA seq
DB search
MGKEKIHINIVVIGHVDSGKSTSTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDIALWKFETGKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSQARFEEIQKEVSTYIKK
IGYNPATVAFVPISGWHGDNMLEASSNMGWFKGWKVERKDGNANGTTLLEALDAILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMLVTFAPANLTTEVKSVEMHHESLT
EATPGDNVGFNVKNVSVKEIRRGYVAGDSKNDPPKGAENFNAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELIEKIDRRSGKKLEDAPKFVKSGDAAIVVMIPQKPMVVESFSNYPP
LGRFAVRDMRQTVAVGVIKSVIPKEVSGKTTKAADKVQKKK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggaaaagatccacatcaacatcgtggtcatcggccatgtcgactccggcaag
tccacctccaccggtcacctgatctacaagtgcggaggaatcgacaagagaaccatcgag
aagtttgagaaggaagccgccgagatgggaaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggcagagcgtgagcgtggtatcaccatcgacatcgctctgtggaagttc
gagaccggcaaatactacgtgaccatcatcgatgcccccggacacagggacttcatcaag
aacatgatcaccggcacgtctcaggctgactgcgccgtgctgattgttgctgccggtgtc
ggtgagttcgaggccggcatctccaagaacggtcagacccgcgagcacgccctgctggcc
ttcaccctcggtgtgaagcagctcatcgtcggagtcaacaagatggactccaccgagccc
ccctacagccaggcccgtttcgaagaaatccagaaggaagtgagcacctacatcaagaag
atcggctacaaccccgccaccgtcgcctttgtccccatctctgggtggcacggagacaac
atgctggaggccagtagcaacatgggctggttcaagggatggaaggtcgagcgcaaggac
ggcaacgccaatggaaccacactgctggaggctctggatgccatcctgcccccctcccga
cccactgacaagcccctgcgtctgcccctgcaggacgtctacaaaatcggaggtattgga
actgtaccagtcggccgcgttgagaccggcatcatcaagcccggcatgctcgtcaccttc
gctcctgccaacctgaccaccgaagtaaagtcggtggagatgcaccacgagtctctgacc
gaagccacccccggcgataatgtcggcttcaacgtcaagaacgtgtccgtcaaggaaatc
cgtcgtggatacgtggccggagacagcaagaacgacccccccaagggagctgagaacttc
aacgcccaggtcatcatcctgaaccaccctggccagatcagccaaggttacgcccccgtg
ctggactgtcacaccgctcacatcgcctgcaagttcagcgagctcatcgagaagattgac
cgtcgttctggaaagaagcttgaggacgcacccaagttcgtcaagtctggagacgcagcc
atcgtggtgatgatcccacagaagcccatggttgtggagtccttctccaactaccctccc
ctcgggcgtttcgccgtgcgtgacatgaggcagacggtggccgtcggtgtcatcaagagt
gtgattccgaaggaggtctccggaaagacaaccaaggctgcagataaggtccagaagaag
aaatga
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