Pungitius pungitius (ninespine stickleback): 119219122
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Entry
119219122 CDS
T07626
Symbol
lrp12
Name
(RefSeq) low-density lipoprotein receptor-related protein 12
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119219122 (lrp12)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
119219122 (lrp12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CUB
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
119219122
NCBI-ProteinID:
XP_037329928
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Position
17:complement(18413785..18422611)
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AA seq
867 aa
AA seq
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MALSPGCRHSLPVVYLLVLSGCFAGSQRNDNVYASGISNACGDVAELLRGSSGVITSPGW
PFQYPARLNCSWNIRVRLGDTVTLSFQDFDLQGSHRCSADWMSISSYKSLDGLRVCGSSL
PPPYISSQDHVWIHFHSDDSLTGKGFRLSYIAGKPEASSCDVDQFHCSNGKCVPDWWRCN
SMDECGDNSDEDLCVESPFSFQPCSLNQFPCLSRYTRIYTCLPHSLRCDGSIDCQDLGDE
IDCDVPTCGELLRNFYGSFSSPNYPDFYPPGSNCTWLIDTGDHRKVILRFTDFKLDGTGY
GDYVKVYDGLEENPRRLLRVLTAFDSRAPVAVMASSGQLRIHFYADKINAARGFNVTYQV
DGFCLPWEVPCGGNWGCYTEQQRCDGFWHCPNGRDEQNCSVCQEDEFPCSRNGACYPRSD
RCNYQNRCPNGSDEKNCFFCQPGNFHCKNNRCVFESWVCDAQDDCGDGSDEESCPVIVPT
RVITAAVIGSLICGLLLVIALGCTCKLYSLRMFERRSFETQLSRVEAELLRREAPPSYGQ
LIAQGLIPPVEDFPVCSGSQASVLENLRLAVRSQLGFTSLRLPSSGRHSNLWRRFFNFSR
SRRSGSLALVSADLEDSAGTGSLSSDLLSPDSDDTDTEGERGRARGFGAVGGPVAPLPQK
IPPSTGVEAVVFVTTSVTPTPTCGRGRDRHPEIQPPSIPVPTLTPSADPERHSNASELQA
QPASGLQRLAHNLHRFARNLTRSSHIRHDQTWTNHSPLHQLETGTSGVEATEQRENQEEE
EDVELLIPVSDSESSSLVSDIRQPLLEPYPPSTTGHAPHHHHANHSRGGRDGPCEHCGMV
HTAQIPDACLEATGKTESSDDELLLLC
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atggccctcagtccaggctgcaggcacagccttccagtggtctacctgctcgtgctgtca
ggatgctttgccgggtcgcagagaaacgacaacgtctacgcgtcggggatttctaatgcc
tgtggagacgtggcggagctcctgcgagggtccagtggcgtcatcaccagtcccggttgg
ccatttcagtatccggctagactcaactgcagctggaacatcagagtgcgactcggagac
accgtcaccctcagtttccaagactttgacctgcagggttcccaccgttgctctgcggac
tggatgtccatcagcagctacaagagcctggacgggctccgggtttgtggttcctccctg
ccgcccccttacatctcctcccaggaccacgtctggatccacttccactccgatgacagt
ctgacagggaaaggcttccgactgtcctacatcgctggcaaaccggaggcctccagctgt
gacgtggaccagttccactgctctaatgggaagtgtgtcccagactggtggcgctgtaac
tccatggacgagtgtggagacaattctgatgaggatctgtgcgtggagtctccgttttcc
ttccagccctgcagtctgaaccagttcccctgcctttcccggtacacccggatctacacc
tgtctgccccacagcctgaggtgtgacggcagcattgactgccaggacctcggtgatgaa
attgactgtgacgttcctacttgtggagaactgttaaggaacttctacggctccttcagc
tctccaaactaccctgacttttaccctccaggaagtaactgcacctggctgattgacaca
ggagaccacaggaaggtcatcctgaggtttactgactttaaacttgatgggacgggttat
ggggactacgtgaaggtctacgacggcttggaggagaaccctcgtcgtctcctccgggtt
ctgaccgccttcgactccagagcgcctgtcgctgtgatggcctcgtccggccagctccga
attcacttctacgccgacaagatcaatgcagccagagggttcaatgtcacctaccaggtg
gacgggttctgcctgccgtgggaggttccgtgtggcggtaactggggctgttacacagag
cagcagcgatgtgatggcttctggcattgtcccaacgggcgtgatgagcagaactgttct
gtctgtcaagaggatgagttcccctgttctaggaacggagcctgttaccctcgatcggac
cgctgcaactatcagaaccgctgccccaacggctctgacgagaagaactgcttcttctgc
caacctggcaacttccactgcaagaataaccgctgcgtgtttgagtcgtgggtgtgtgat
gctcaggacgactgtggcgatgggagtgacgaggagagttgtcccgtcatcgttccgacc
agagtcatcacggccgccgtcatcgggagcctcatctgtggcctcctgttggtcatcgcc
ctcggctgcacctgcaaactgtactcgctccgcatgtttgagcgcaggtcatttgagacc
cagttgtccagagtggaagcagagctgctgcggagggaagccccgccctcttatggtcaa
ctgatcgcccagggactgatccctcctgtggaggacttccctgtgtgctctgggagccag
gcctctgtcctggagaacctccgtctggctgtccgctctcagctaggcttcacctctctg
agactcccctcctcgggtcgtcatagcaacctgtggcgtcgtttcttcaacttctcaagg
tcacggcgatcaggttctctggctctggtgtctgctgacctggaggacagtgctggcaca
gggagtttaagttcagacctgctgtctccggactcggacgacaccgacaccgagggcgag
cgaggcagggcgcgaggcttcggcgcagtgggtggacctgtcgccccccttccccaaaag
atcccgccctccactggcgtggaggcggtggtattcgtgactacctccgtaaccccgacg
ccgacttgtgggcgaggacgtgacaggcacccagagattcagcccccctccatccccgtc
cccacattaactcccagcgcagatcccgaacgtcacagcaacgcctcagagctgcaggct
cagcccgcctctggcctgcagcgactggctcacaacttgcaccgcttcgccagaaacttg
accagatccagccacatccggcatgaccaaacctggaccaatcacagtccgcttcaccag
ctggagactgggacaagtggggtggaggccacagagcagcgagaaaaccaagaagaagaa
gaagacgtggagctcctgattcccgtctcggactctgaatcctcctccctggtgagcgac
atccgacagcctctgctagaaccgtaccccccctctaccacaggccacgccccccaccat
caccacgcaaaccattctcgaggaggccgggacggcccgtgtgaacactgtgggatggtc
cacacggctcagatccctgacgcatgtctggaagccacaggaaagacagagagcagtgac
gatgagctactgctgctgtgctaa
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