Pungitius pungitius (ninespine stickleback): 119219262
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Entry
119219262 CDS
T07626
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119219262 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
119219262 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ppug00535
]
119219262 (sdc3)
Proteoglycans [BR:
ppug00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
119219262 (sdc3)
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Motif
Pfam:
Syndecan
Transformer
SDH8
GAP45
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
119219262
NCBI-ProteinID:
XP_037330240
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Position
17:11206635..11235409
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AA seq
439 aa
AA seq
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MKLPWLLALAAVLAHTATGQTRSQSIDDEGSAGDEFYDDEDLYSGSGSGFPGISSKPTSA
GVSFTTEEPLFLSTTQATGPAPSASPAAEPSPNPEDPNATLLPTEADGESGVFTEGEREL
EKERELEKERQREQEREREKQLERERERERERERVREMEREREREREREREREREKERER
QRERELERERELERIRAAARTTAAPRPPAVPTSAPTSPTESAPPAAGWDDLSTTEEEEDV
YLSPEPSAVYPGSNMETTTEEDMSTTAEPTPEPTTAAPAATTTAATVKTRLPFRPRVPTA
TATPAVKTARTMRPQQPTVTQEGNNEAGAAAPSGDSEVRDNQPNDLGRGVMPVDPDLIGN
TVDGGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLLVYRMKKKDEGSYTLEE
PKQATVTYQKPDKQEEFYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgccttggcttttggcgctcgcggcagtgctcgcccacaccgccacgggacag
acccggtcccagtctatcgatgacgaaggctcagcgggagacgagttctacgacgacgag
gacctctactcgggctccggctctggctttcctgggatcagttctaagccgacatcggca
ggtgtgtccttcaccacggaggagcccctcttcctctccaccacacaggccaccggcccc
gccccctccgcctcacccgccgccgagccgagccccaacccggaggaccccaacgccacc
ctgctgcccaccgaggccgacggagagagcggtgtgttcactgaaggagagagggagctg
gagaaggagagagagttagagaaggagagacagagagagcaagagagggagagggagaag
cagttggagagggagagagagagggagagagagagggagcgcgtccgagaaatggagaga
gagagagagcgggagcgagagagggagcgcgagagggagagggagaaagagagagagaga
cagagggagcgcgaactcgaaagggagagagagctggagcgaatcagggccgccgcccgg
accaccgccgccccacgaccccccgcggtgcccaccagcgctccaacaagccccacagag
agcgcgccgcccgcggccggctgggacgacttgagcaccacagaagaagaagaggacgtc
tacctgtcacctgaaccctcggccgtttacccgggctcaaacatggaaaccaccacagag
gaagacatgtccaccacagcagagcccacccccgagcccacgacagccgcacctgccgcc
accaccaccgccgccactgtcaagaccaggttgcccttcaggcccagggttcccacggcg
acggccactccggcggtgaagacagcgaggacgatgcgtccacagcagccgacagttaca
caggagggcaacaacgaggcgggcgccgcggcgccaagcggggactccgaggtccgcgat
aatcagccaaatgatctcggccgaggtgtaatgccagtggatcccgatctgatcggcaac
acggtggacggaggaagctccgccgcccagctgccgcagaagaacatcctggagagaaag
gaggtcctgatagcggtcatagtgggaggagtggtgggcgccttgttcgcggccttccta
gtgatgttgctggtgtacaggatgaagaagaaggatgagggaagctacacactggaggaa
cccaaacaggccaccgtcacctaccagaagccagacaagcaggaggagttttacgcgtaa
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